Protein Info for AO353_04485 in Pseudomonas fluorescens FW300-N2E3

Annotation: phosphoribosylformylglycinamidine synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1298 TIGR01735: phosphoribosylformylglycinamidine synthase" amino acids 3 to 1297 (1295 residues), 2130.2 bits, see alignment E=0 PF18076: FGAR-AT_N" amino acids 35 to 148 (114 residues), 134.9 bits, see alignment E=2.5e-43 PF18072: FGAR-AT_linker" amino acids 169 to 218 (50 residues), 80.1 bits, see alignment (E = 2.7e-26) PF02769: AIRS_C" amino acids 430 to 587 (158 residues), 118.2 bits, see alignment E=7.7e-38 amino acids 839 to 966 (128 residues), 52.8 bits, see alignment E=1e-17 PF13507: GATase_5" amino acids 1042 to 1297 (256 residues), 369.7 bits, see alignment E=1.3e-114

Best Hits

Swiss-Prot: 65% identical to PUR4_ECO57: Phosphoribosylformylglycinamidine synthase (purL) from Escherichia coli O157:H7

KEGG orthology group: K01952, phosphoribosylformylglycinamidine synthase [EC: 6.3.5.3] (inferred from 66% identity to abo:ABO_0785)

MetaCyc: 65% identical to phosphoribosylformylglycinamide synthetase (Escherichia coli K-12 substr. MG1655)
Phosphoribosylformylglycinamidine synthase. [EC: 6.3.5.3]

Predicted SEED Role

"Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)" in subsystem De Novo Purine Biosynthesis (EC 6.3.5.3)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.3.5.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WBV7 at UniProt or InterPro

Protein Sequence (1298 amino acids)

>AO353_04485 phosphoribosylformylglycinamidine synthase (Pseudomonas fluorescens FW300-N2E3)
MLILRGAPALSAFRHSKLLEQLSQKVPAVSGLYAEFAHFAEVTGVLTGDEQQVLARLLKY
GPSVPVQEPTGRLFLVLPRFGTISPWSSKASDIARNCGLAKIQRLERGIAFYVTGEFTDA
QAQLIADGLHDRMTQIVLENLEQAAGLFSHSEPKPLTAIDVLGGGRAALETANVELGLAL
AEDEIDYLVNAFIGLKRNPHDIELMMFAQANSEHCRHKIFNASWDIDGESQEKSLFGMIK
NTYVMHSEGVLSAYKDNASVIVGSVAGRFFPDPETRQYGAVQEPVHILMKVETHNHPTAI
APFPGASTGSGGEIRDEGATGRGAKPKAGLTGFTVSNLQIPGFEQPWEVPYGKPERIVTA
LDIMIEGPLGGAAFNNEFGRPALTGYFRTFEQSITTPRGDEVRGYHKPIMLAGGMGNIRE
EHVKKGEILVGSKLIVLGGPAMLIGLGGGAASSMATGTSSADLDFASVQRENPEMERRCQ
EVIDRCWQLGERNPISFIHDVGAGGLSNAFPELVNDGDRGGRFELRNIPNDEPGMAPHEI
WSNESQERYVLAVGPADFERFKAICERERCPFAVVGEATAEPQLTVTDSHFGNSPVDMPL
EVLLGKAPRMHRSAVRETELGDDFDPSTLAIADCVERVLHHPAVASKSFLITIGDRTITG
LVARDQMVGPWQVPVADVAVTATSFDVYTGEAMAMGERTPLALLDAPASGRMAIGETLTN
IAASRIGKISDIKLSANWMSAAGHPGEDARLYDTVKAVGMELCPELGITIPVGKDSMSMA
TRWNDEGVDKTVTSPMSLIVTGFAPVTDIRQTLTPQLRMDKGTTDLILIDLGRGQNRMGA
SILAQVHGKLGKQAPDVDDAEDLKAFFAVIQGLNADGHLLAYHDRSDGGLLTSVVEMAFA
GHCGLSLNLDGLAETSADIAAILFNEELGAVIQVRQDSTPDILAQFSAAGLGDCVSVIGQ
PMNNGEISITFNGDTVFEGQRRLLQRQWAETSYQIQRLRDNADCAEQEFDVLLEEDNPGL
SVKLSYDVNQDVAAPYIKKGIRPQVAVLREQGVNGQVEMAAAFDRAGFNAIDVHMSDILA
GRVDLNEFKGLVACGGFSYGDVLGAGEGWAKSALFNSRARDAFQGFFERTDSFTLGVCNG
CQMMSNLHELIPGSEFWPHFVRNRSEQFEARVAMVQVQESNSIFLQGMAGSRMPIAIAHG
EGHAEFASEEALLQADLSGCVAMRFVDNHGKVTERYPANPNGSPRGITGLTSRDGRVTIM
MPHPERVFRAVQNSWRSEEWNEDAPWMRMFRNARVWVN