Protein Info for AO353_04395 in Pseudomonas fluorescens FW300-N2E3

Annotation: cytochrome C assembly protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF01578: Cytochrom_C_asm
  • amino acids 44 to 267 (224 residues), 137.3 bits, E=2.9e-44

Best Hits

KEGG orthology group: None (inferred from 94% identity to pfo:Pfl01_1017)

Predicted SEED Role

"Glutamate synthase [NADPH] small chain (EC 1.4.1.13)" in subsystem Ammonia assimilation or Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis (EC 1.4.1.13)

MetaCyc Pathways

• L-citrulline biosynthesis (7/8 steps found)
• L-asparagine biosynthesis III (tRNA-dependent) (4/4 steps found)
• glutaminyl-tRNA^gln biosynthesis via transamidation (4/4 steps found)
• L-glutamate and L-glutamine biosynthesis (6/7 steps found)
• ammonia assimilation cycle III (3/3 steps found)
• L-glutamate biosynthesis I (2/2 steps found)
• superpathway of L-citrulline metabolism (9/12 steps found)
• L-glutamine degradation I (1/1 steps found)
• L-glutamine degradation II (1/1 steps found)

KEGG Metabolic Maps

• Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
• Glutamate metabolism
• Nitrogen metabolism

Isozymes

Compare fitness of predicted isozymes for: 1.4.1.13

Use Curated BLAST to search for 1.4.1.13

Sequence Analysis Tools

See A0A0N7GZH1 at UniProt or InterPro

Protein Sequence (270 amino acids)

>AO353_04395 cytochrome C assembly protein (Pseudomonas fluorescens FW300-N2E3)
MLPLSPSLLSTLAAACLYAAATLYQGTRLAQGAKANKRLLVSLGILAVLAHSASLLTHLM
MPTGLGLDFFSAASLIAAAVIALTLLACSRIPVENLLVLLFPLGMTTVLLAQFAPSGTVQ
VIDEEPGILAHILLSILAYGMFTIAVFQALLLLVQDHQLKHKHPSGLIKNFPPLQTMESL
LFGFLWAGWTLLSLSLISGWLFVENLFAQHLVHKTLLACLAWIVFSVLLWGRNRLGWRGH
KAIRWTLAGFCLLMLAYFGSKLVREFILHI