Protein Info for AO353_03470 in Pseudomonas fluorescens FW300-N2E3
Annotation: arginine deiminase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 82% identical to ARCA_PSEAE: Arginine deiminase (arcA) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
KEGG orthology group: K01478, arginine deiminase [EC: 3.5.3.6] (inferred from 95% identity to pba:PSEBR_a1198)Predicted SEED Role
"Arginine deiminase (EC 3.5.3.6)" in subsystem Arginine Deiminase Pathway or Arginine and Ornithine Degradation (EC 3.5.3.6)
MetaCyc Pathways
- L-arginine degradation XIII (reductive Stickland reaction) (5/5 steps found)
- L-arginine degradation V (arginine deiminase pathway) (4/4 steps found)
- L-arginine degradation XIV (oxidative Stickland reaction) (2/6 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.5.3.6
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A0N7GZE9 at UniProt or InterPro
Protein Sequence (418 amino acids)
>AO353_03470 arginine deiminase (Pseudomonas fluorescens FW300-N2E3) MTTEKVKYGVHSEAGKLRKVMVCSPGLAHQRLTPNNCDELLFDDVLWVAQAKRDHFDFVT KMRERDIDVLEMHNLLTDIVANPEALGWILQRKITANSVGVGLVHEVDAWLRSLEPRKIA EFLIGGVSADDLPNSFGGKTIEMFRDFLGHSSFILPPLPNTQFTRDTTCWIYGGVTLNPM HWPARRQETLLASAIYKFHPEFTNADFQVWYGDPDQEHGNATLEGGDVMPIGNGVVLIGM GERTSRQAIGQLALNLFKHKAVERVIVAGLPKSRAAMHLDTVFSFCDRDLVTIFPEVVSQ IVAFTLRPDESKPGGIDIRREETSFLDTVAAALNLKALRVVETGGNSFAAEREQWDDGNN VVALEPGVVIGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGHCMTCPIIRDPIDY