Protein Info for AO353_02755 in Pseudomonas fluorescens FW300-N2E3

Annotation: peroxiredoxin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 155 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF00578: AhpC-TSA" amino acids 27 to 133 (107 residues), 74.9 bits, see alignment E=1.1e-24 PF08534: Redoxin" amino acids 27 to 135 (109 residues), 45.1 bits, see alignment E=1.9e-15 PF13905: Thioredoxin_8" amino acids 40 to 131 (92 residues), 36.9 bits, see alignment E=7.8e-13

Best Hits

KEGG orthology group: None (inferred from 83% identity to pfo:Pfl01_4227)

Predicted SEED Role

"Cytochrome c-type biogenesis protein ResA" in subsystem Biogenesis of c-type cytochromes

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WCN0 at UniProt or InterPro

Protein Sequence (155 amino acids)

>AO353_02755 peroxiredoxin (Pseudomonas fluorescens FW300-N2E3)
MTRRLTAALTLFATLLLGGCGYDYGTDQLGQKVASERLDGRWFVLNYWAEWCSPCRTEIP
QLNVLAEQLKGQKISVFGVNFDNVQGEELKSASEKLGITFTVLAQDPADRFELPRSEALP
VTYIIDDKGKVREQLMGEQTAAGVMAKLKVLQATN