Protein Info for AO353_02325 in Pseudomonas fluorescens FW300-N2E3

Annotation: OHCU decarboxylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 171 PF09349: OHCU_decarbox" amino acids 11 to 168 (158 residues), 170.7 bits, see alignment E=1.7e-54 TIGR03164: OHCU decarboxylase" amino acids 13 to 169 (157 residues), 229.8 bits, see alignment E=8e-73

Best Hits

Swiss-Prot: 41% identical to URAD_HALVD: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (HVO_B0301) from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)

KEGG orthology group: None (inferred from 91% identity to pfl:PFL_4367)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WE78 at UniProt or InterPro

Protein Sequence (171 amino acids)

>AO353_02325 OHCU decarboxylase (Pseudomonas fluorescens FW300-N2E3)
MTAFQTLKPSTLSRDAFVNAFADIYEHSPWVAEKAFDLGQDAAIDEIETLHQRMSDILLC
ADHASQLALINAHPDLAGKAAVQGQLTAASTEEQSGAGIHQCTSEEFQRFTELNDAYKAK
FKFPFIMAVKGSNRHQILAAFETRIHNSADTEFKCALAEINKIALFRLLTL