Protein Info for AO353_01975 in Pseudomonas fluorescens FW300-N2E3

Annotation: glycosyl transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 339 transmembrane" amino acids 6 to 25 (20 residues), see Phobius details amino acids 47 to 66 (20 residues), see Phobius details amino acids 72 to 90 (19 residues), see Phobius details amino acids 102 to 127 (26 residues), see Phobius details amino acids 131 to 150 (20 residues), see Phobius details amino acids 159 to 177 (19 residues), see Phobius details amino acids 183 to 201 (19 residues), see Phobius details amino acids 212 to 230 (19 residues), see Phobius details amino acids 236 to 255 (20 residues), see Phobius details amino acids 286 to 308 (23 residues), see Phobius details amino acids 314 to 331 (18 residues), see Phobius details PF00953: Glycos_transf_4" amino acids 79 to 227 (149 residues), 123 bits, see alignment E=5.9e-40

Best Hits

KEGG orthology group: K13007, Fuc2NAc and GlcNAc transferase [EC: 2.4.1.-] (inferred from 69% identity to pen:PSEEN1505)

Predicted SEED Role

"Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)" in subsystem Methicillin resistance in Staphylococci or Teichoic and lipoteichoic acids biosynthesis (EC 2.7.8.-)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.4.1.-, 2.7.8.-

Use Curated BLAST to search for 2.4.1.- or 2.7.8.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VJ38 at UniProt or InterPro

Protein Sequence (339 amino acids)

>AO353_01975 glycosyl transferase (Pseudomonas fluorescens FW300-N2E3)
VSYGWFALLAVGISFFLTRAMRRYALSRSLVDIPNARSSHVLPTPRGGGVAIVLTFLMAL
GPLLFFGLISPAVFAACAGAGGLIAIIGFMDDHGHIAARWRLLGHFIAASWAIFWLGGLP
AINVLGIVFDTGWVGSALAVVYLVWMLNLYNFMDGIDGIAGVEAVCACIGACLMYGMSGQ
NGLIWAPLLLCASVAGFLCWNIPPAKIFMGDAGSGFLGIILGVLSLQAGWISAQLLWGWL
ILFGVFIVDATFTLFRRLMRGDRIYEAHRSHAYQFASRQFGKHLPVTLAVGLINLCWLLP
IALCVALYSLDGAIGLLLAYSPLLVLAWWFRAGELESPP