Protein Info for AO353_01095 in Pseudomonas fluorescens FW300-N2E3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 613 PF02543: Carbam_trans_N" amino acids 5 to 346 (342 residues), 299.7 bits, see alignment E=3.5e-93 PF16861: Carbam_trans_C" amino acids 404 to 594 (191 residues), 238.5 bits, see alignment E=3.2e-75

Best Hits

KEGG orthology group: K00612, carbamoyltransferase [EC: 2.1.3.-] (inferred from 58% identity to ami:Amir_3924)

Predicted SEED Role

"Nodulation protein nolO (EC 2.1.3.-)" (EC 2.1.3.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.1.3.-

Use Curated BLAST to search for 2.1.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WBQ9 at UniProt or InterPro

Protein Sequence (613 amino acids)

>AO353_01095 hypothetical protein (Pseudomonas fluorescens FW300-N2E3)
MAIYVLGISAFYHDSAAALVKDGVPVAAAQEERFTRVRHDAAFPAQAIQYCLDAEGITLD
DLEAVVYYEDPQEKFSRVISSFASGGIGGARTFINAMPEWIRWKWNVLKFVDEKLEELER
GKAPRTQASQHHRSHAAAAFYPSPFENAAVLCIDGIGEWHSTTIWQGEGSRLELKNSISY
PHSVGLFYSAMTYYCGFKVDSGEYKLMGLAPYGQPIYADKIRDELINIRPDGSFTLNMKY
FEYLRGERMVGEAFEELFGGPIRKPESPISQRECDLAASVQKVTEEVVLGLATAAVKQTG
KRNLCLAGGVALNCVANGVLSRSGRFDSIWIQPAAGDAGCALGAAMDYSVKRTGRPHLTG
SKTDAMSGSLLGPGFGDEEIEAFLRENNYPYTRYDDAQLYDQVASRLADGAVVGWFQGRM
EFGPRALGARSILGDARNPEMQRTMNLKIKYRESFRPFAPAVLAEDAKTYFDICESSPYM
LMVAPVTDSIKSETSLKEGGPARGLGSINNIRSQLPAVTHVDLSARVQTVTEENNAPFTY
LLRSFKARTGCSVLVNTSFNVRGEPIVCKPQEAYACFMRTEMDVLVLGRFVLERPGQPAF
VEEVDWRSEIPLD