Protein Info for AO353_01050 in Pseudomonas fluorescens FW300-N2E3

Annotation: poly(3-hydroxyalkanoate) synthetase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 772 PF11339: DUF3141" amino acids 69 to 624 (556 residues), 795.3 bits, see alignment E=1.8e-243

Best Hits

KEGG orthology group: None (inferred from 68% identity to psa:PST_0691)

Predicted SEED Role

"Poly(3-hydroxyalkanoate) synthetase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VP41 at UniProt or InterPro

Protein Sequence (772 amino acids)

>AO353_01050 poly(3-hydroxyalkanoate) synthetase (Pseudomonas fluorescens FW300-N2E3)
MGQEDIIASQYKKPFSQRGLFEHLSHLQRLNTLNILDALRQRQEKTFAPLKQGQLRQPTP
AEWQEYVTDLGQRCLLFWDTLRQRGDNTLAHERAGYPLLLKFDHETLIAGADLPRPVNYS
LLRILLGPEQKIDSNGQPVIIIDPRGGHGSGIGGFKQDSVLGESLRAGHPTYFISFSHSP
QPGQTLADIVEAQARFIEVVSALHPTNSKPIIIGNCQAGWALMGLAATRPELPGLIIING
APLSYWAGVNGRNPMRYTGGLLGGGWMARLGSDLGNNRFDGTWLVSNFENLDPANTYWGK
YYQLFSQIDSEAARFLDFERWWGSPTLLNGEEIEMIVDDLFIGNQLSGGLGRKSSGIDLK
RIEVPVVVFCSYGDNITPPQQALNWIADVYPSDLALHDAGRTIVYLRHASIGHLGIFVSG
KVARREHRGLLGAVEAINALPAGLYEMLIDDLPAPSGSSDVQYSVSFESRRIADIHDDVE
PARDDDREFSLVEHASEINSEFYDGFIRPWLRQVVNEPIAELIRRTHPFHQQQLLWSSLN
PALWWLAGAASQVSSDRRPARQDNPLLAWQELFSNQIQDALNAYRDVRDATQELCFYGIY
GALGALTSNSPVRNLQAHADQQDQALIERLQDALPHGGPLEALVRILFLLGRDSDKAGKE
SIEKLIQQVHLLVQDYSTEPTALREAIRLQNLLVFAHPQESLRSLPLLLPEAKERQQVLT
AVGQLMPELLSTAGTEGEFWRELHTLLEVPLPAPAIVVKAPKRKATKGPKPQ