Protein Info for AO353_00740 in Pseudomonas fluorescens FW300-N2E3

Annotation: molybdenum cofactor sulfurylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 280 PF02625: XdhC_CoxI" amino acids 12 to 75 (64 residues), 72.7 bits, see alignment E=1.9e-24 TIGR02964: xanthine dehydrogenase accessory protein XdhC" amino acids 19 to 249 (231 residues), 328.5 bits, see alignment E=1.4e-102 PF13478: XdhC_C" amino acids 107 to 248 (142 residues), 123.6 bits, see alignment E=7e-40

Best Hits

KEGG orthology group: K07402, xanthine dehydrogenase accessory factor (inferred from 91% identity to pfo:Pfl01_1795)

Predicted SEED Role

"XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)" in subsystem Purine Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WBK9 at UniProt or InterPro

Protein Sequence (280 amino acids)

>AO353_00740 molybdenum cofactor sulfurylase (Pseudomonas fluorescens FW300-N2E3)
MYNWIDALADLQNQGEPCVLVTIIEELGSTPRNAGSKMVVSATQAFDTIGGGHLEYKAMQ
VAREMLASGKQDTHLERFTLGASLGQCCGGVTVLLFEPMGQVQAQIAVFGAGHVGRALVP
LLASLPCRVRWIDSREAEFPEQVPHGVRKIVAEEPVDEIDDLPVGSYCIVMTHNHQLDLE
LTAAILKRNDFAYFGLIGSKTKRVKFEHRLRERGFDNAVLQRMRCPMGLGEVKGKLPVEI
AISIAGEIIATYNANFGQHGAKAEPIAKLLPASRRSHASN