Protein Info for ABZR87_RS23595 in Ralstonia sp. UNC404CL21Col

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 429 transmembrane" amino acids 6 to 27 (22 residues), see Phobius details amino acids 295 to 317 (23 residues), see Phobius details amino acids 333 to 353 (21 residues), see Phobius details amino acids 365 to 386 (22 residues), see Phobius details PF13641: Glyco_tranf_2_3" amino acids 43 to 276 (234 residues), 90.8 bits, see alignment E=3.2e-29 PF00535: Glycos_transf_2" amino acids 46 to 212 (167 residues), 94.2 bits, see alignment E=2.2e-30 PF13506: Glyco_transf_21" amino acids 103 to 276 (174 residues), 31.4 bits, see alignment E=3.4e-11 PF13632: Glyco_trans_2_3" amino acids 129 to 326 (198 residues), 37.2 bits, see alignment E=7.6e-13

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (429 amino acids)

>ABZR87_RS23595 glycosyltransferase (Ralstonia sp. UNC404CL21Col)
MDAIVSLVFALPWFVLVMNFGLALVFRWNVKSTFIKKDYGLQPSVSILLPSYNEGRHVFK
TIESILASDYPSEKIEVVAVDDCSSDDTFAWVQKAAARWPNVQAHRNAVNSGKHHTLSKA
LSHSSGEILICIDSDCIFDGPAIKEMMACFADPGIGAVGGRVGVSNPTENILTRCQTLVY
YYAFQVSKMMQNWTRNVMCISGCLFAVRREHFMAIEQTVKERNWFGIGVRDGEDRYMTHL
LLLSGLKTYCDVQAQCWTVVPNNLKQLFMQQLRWRRGSLRDFFWSLRMFRSNMKVLHPLT
LINMLIPGALTLMWPVMHAYTLSTGWLGQELFVATQLHISMSVTAGVIFFLYASMHNPEQ
RVSPFGVALLGFWFMVDSFFITILALCTFDVGEWGTRGPSAKPEPAPELFQRGGDARPEA
PVFAAQYPD