Protein Info for ABZR87_RS23555 in Ralstonia sp. UNC404CL21Col

Annotation: glycosyltransferase family 1 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 390 PF13439: Glyco_transf_4" amino acids 15 to 183 (169 residues), 88.1 bits, see alignment E=2.2e-28 PF13579: Glyco_trans_4_4" amino acids 16 to 171 (156 residues), 58.9 bits, see alignment E=2.4e-19 PF20706: GT4-conflict" amino acids 171 to 313 (143 residues), 40.7 bits, see alignment E=4.7e-14 PF00534: Glycos_transf_1" amino acids 192 to 352 (161 residues), 105.2 bits, see alignment E=8.6e-34 PF13692: Glyco_trans_1_4" amino acids 204 to 339 (136 residues), 107.2 bits, see alignment E=2.6e-34 PF13524: Glyco_trans_1_2" amino acids 277 to 355 (79 residues), 27.4 bits, see alignment E=9.6e-10

Best Hits

KEGG orthology group: None (inferred from 81% identity to rpi:Rpic_3774)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (390 amino acids)

>ABZR87_RS23555 glycosyltransferase family 1 protein (Ralstonia sp. UNC404CL21Col)
MRIAYVTETWPPELNGVSLTAARTVAFLQTRGHDVMLVRPRQSAIDAGKPALADDTLRVP
GVPIPLYPDLRMGLPARRRLLRAWSTYRPELVHVATEGPLGWSAIRAARQLGVPVTSDFR
TRFDEYGRHYAWEGAVTLVRAYLRAFHNRTDRTFVPTRELQRQLSDLDFERLTVSTRGVD
AHRFTPQARSDALRTQWGVAADTPVVLTVGRLALEKNLGVALDAFDAVRERVPHARLVMV
GDGPQRNALRRRCPDAIFAGTQHGEALAAHYASADLFLFPSLTETFGNVVVEAMASGLPV
VAFDTAAAGMHVRSAENGLLARVGDAASFARHAVTLATDAGLRQRLGQAARATAQTLDWP
RVLERFEDALIAVHDAATNGEAYHGDPRLA