Protein Info for ABZR87_RS21320 in Ralstonia sp. UNC404CL21Col

Annotation: putative zinc-binding metallopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 374 PF10005: zinc-ribbon_6" amino acids 3 to 115 (113 residues), 98.5 bits, see alignment E=3e-32 PF15887: Peptidase_Mx" amino acids 121 to 365 (245 residues), 363.7 bits, see alignment E=4.3e-113

Best Hits

KEGG orthology group: None (inferred from 77% identity to rsl:RPSI07_mp1063)

Predicted SEED Role

"Uncharacterized protein conserved in bacteria"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (374 amino acids)

>ABZR87_RS21320 putative zinc-binding metallopeptidase (Ralstonia sp. UNC404CL21Col)
MKTFHCNRCQQLVFFENVLCERCNALLGYLPDVGEISAFEPADEPTETAQTGQTPETATA
AHKRWHSLHPQAQGQLYRQCHNYAVENVCNWMIPADSPDTLCRACQFTETIPDLTVSENR
FYWYKMEVAKRRLLYTLMTLGLPLESRLENPETGLEFAFLESKENSEPVMTGHNHGRITL
NIAEANDAAREKARTELREPYRTLLGHFRHESGHYFFDRLIAGKPMWEAAFRERFGDERA
GYADALKTYYDNGPPADWAQHYISAYATMHPWEDWAETWAHYLHMVDALDTAVSYGLALL
PDHPQEPELTDQTPVEEASFNNLMSRWFPLTYVLNGLNRSLGQPDGYPFTLASPVIDKLR
FVHRVIAASAQKPG