Protein Info for ABZR87_RS21315 in Ralstonia sp. UNC404CL21Col

Annotation: transglutaminase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1138 PF08379: Bact_transglu_N" amino acids 6 to 84 (79 residues), 83.2 bits, see alignment 2.7e-27 PF01841: Transglut_core" amino acids 130 to 246 (117 residues), 61.7 bits, see alignment E=1.2e-20 PF09899: DUF2126" amino acids 276 to 1136 (861 residues), 1348.8 bits, see alignment E=0

Best Hits

Predicted SEED Role

"Large protein containing transglutaminase-like domain"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1138 amino acids)

>ABZR87_RS21315 transglutaminase family protein (Ralstonia sp. UNC404CL21Col)
MSIRVALNHVTHYRYDRLVELSPQVVRLRPAPHCRTPIHSYSMRVEPAEHFINWQQDAFA
NYQARLVFPHKTREFKVTIDLVAEMAVYNPFDFFLAPEAESFPFSYADDLAAELAPYLVK
REMTPNFAAFVASIDRTPRRTIDFLVELNQRLQQDIRYLIRMEPGVQTPEETLSLGSGSC
RDTGWLMVQTLRQLGLAARFVSGYLLQLTPDVKAVDGPSGTEVDFTDLHAWCEVYLPGAG
WIGFDPTSGLLAGEGHIPVACTPEPGSAAPISGAVDECEVEFEHTMSITRVLEAPRVTKP
YTEAHWADVVRMGAQVDAELDAMDVRLTMGGEPTFVAVRDRDAAEWNTDALGPTKRSYAV
ALMDKLRQRYGANGFLHIGQGKWYPGEQLPRWALSLYWRTDGQPCWNDPTLFADEREPGR
YTSADAQRFLHHLARKLSVDEQCIQAGYEDTWYYLWRERRLPVNVDPFDSQLDDEMERVR
LRRVFDAGLSAVTGYVLPLARESDAALGGARWATGPWFFRDERMYLIPGDSPMGYRLPLD
SLPWVSKSDYPYQHAHDPFGPSAPLRTAAELRMQYQGETAGATLVAATKATSAARGTGSA
TDARIPARSESASWVHRTAVCVEARDPARAAGPKVENDTFGSGHSQLHVFMPPLTVLDDY
LDLLAAVEATADELQVQVVVEGYPPPRDPRLKLLQVTPDPGVIEVNIHPASNWEQLVDHT
EYLYESAHQSYLSTEKFMLDGRHTGTGGGNHFVLGGATPADSPFLRRPDLLASLIAYWHN
HPSLSYLFSGLFIGPTSQAPRVDEARNDQVYELEIAFAELQHQLDRLGAANIPPWLIDRI
LRNILIDVTGNTHRAEFCIDKLYSPDGPTGRLGLLELRGFEMPPHARMSLVQQLLLRALV
ARFWKTPYTTRLTRWGTELHDRFLLGTFVQMDFDDVLADLREAGYAFEREWFAPHFSFRF
PLVGELHTGGISLTLSGALEPWHVMGEEGAQGGTVRYVDSSVERLEVRVLGLNENRHVVT
VNGIPLPLQPTGRVSEQVAGVRFRAWSQPSALHPTIGVHAPLTFDLADTWTGRSLGGCQY
HVAHPGGRNYQTFPVNAYEAESRRRARFFTIGHTPGPMEVRAPERSLEFPFTLDLRRY