Protein Info for ABZR87_RS20855 in Ralstonia sp. UNC404CL21Col

Annotation: fumarylacetoacetase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 423 TIGR01266: fumarylacetoacetase" amino acids 7 to 419 (413 residues), 605.4 bits, see alignment E=2.7e-186 PF09298: FAA_hydrolase_N" amino acids 22 to 123 (102 residues), 109.7 bits, see alignment E=7.9e-36 PF01557: FAA_hydrolase" amino acids 130 to 398 (269 residues), 131.3 bits, see alignment E=4.2e-42

Best Hits

Swiss-Prot: 57% identical to FAAA_MOUSE: Fumarylacetoacetase (Fah) from Mus musculus

KEGG orthology group: K01555, fumarylacetoacetase [EC: 3.7.1.2] (inferred from 97% identity to rpi:Rpic_4535)

MetaCyc: 59% identical to Fumarylacetoacetase (Homo sapiens)
Fumarylacetoacetase. [EC: 3.7.1.2]

Predicted SEED Role

"Fumarylacetoacetase (EC 3.7.1.2)" in subsystem Homogentisate pathway of aromatic compound degradation or Salicylate and gentisate catabolism (EC 3.7.1.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.7.1.2

Use Curated BLAST to search for 3.7.1.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (423 amino acids)

>ABZR87_RS20855 fumarylacetoacetase (Ralstonia sp. UNC404CL21Col)
MTTRQLSWLESANTPDTHFPLENLPFGIFSTKENPSPRAGVALGDQVIDLGALDDAGLLP
AATRGAFRTGKLNTFIALGKPVWAETRKKLQALFSVADTHVRDNATLHARALVPQAHAVM
HLPIDIPGYTDFYSSKEHATNVGRMFRDPENALLPNWLEIPIGYNGRASSVVVSGTPLHR
PMGQIKLPDQPRPIFTACRKLDYELEMAFVVGKPSALGEPVSVDAAPDHMFGVVLLNDWS
ARDIQQWEYVPLGPFNSKGFGTSISPWIVTMEALEPFRVANPAQSPEPLEYLRQSRPNAY
DIALETALRPHGGARTTIARTNFRAMYWTMAQQLAHHTVSGCNVRVGDLMGSGTISGTTP
DSYGSLLELTVNGKQPLDLGNGTTRAFLEDGDEVTMTGWCQGDGYRVGFGEVRGEILPAR
SVK