Protein Info for ABZR87_RS20000 in Ralstonia sp. UNC404CL21Col

Annotation: bifunctional aminoglycoside phosphotransferase/ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 515 transmembrane" amino acids 261 to 278 (18 residues), see Phobius details amino acids 407 to 423 (17 residues), see Phobius details amino acids 443 to 459 (17 residues), see Phobius details PF01636: APH" amino acids 110 to 291 (182 residues), 28.1 bits, see alignment E=1.8e-10 PF13671: AAA_33" amino acids 351 to 491 (141 residues), 115.8 bits, see alignment E=2.1e-37

Best Hits

KEGG orthology group: K07028, (no description) (inferred from 87% identity to rpi:Rpic_4416)

Predicted SEED Role

"FIG00976694: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (515 amino acids)

>ABZR87_RS20000 bifunctional aminoglycoside phosphotransferase/ATP-binding protein (Ralstonia sp. UNC404CL21Col)
MAEQATILASTQAEEAFVSRMLDAAAYPHPAADLQMIETHLSWVFLAGEFAYKVRKPVTL
DFVDFSTLRARQIDCEEECRLNRRLAPTLYVGVVPISLDPATGAIRVNGQGAPCEYAVCM
RRFSQQDVLSAVAHDGRLGPKEIDALADLIADFHATAPVASSSSDDGTPSSIRRTLEDCA
AGVIALSTAPTLAEATVSQLRQEADRLEAAFASRRRSRHVRECHGDLHLGNIVLIDGQPT
PFDCLEFSPSLRWIDTMYDTAFLFMDLLAAGLDGLAYRLINRYLERCGDYGGLAVLPFYA
SMRALVRARVLLERAHQLDGAPDLAAKPRAEARRMLNLSHELLSRNEACILLMHGLSGSG
KSTRAAQLAQTEQMIRVRSDVERQRSRHVAAADRYLPRAVERTYRRLAAICKLGACAGFP
MIADATFLAEHQRRRFFSLGRRLGVALAIADCVADVDTLRARIRNRMRDGRDASEADLHV
LDTQIATQEPLNVEERTHVIPDDICKVVQTIRGSQ