Protein Info for ABZR87_RS19605 in Ralstonia sp. UNC404CL21Col

Annotation: cytochrome P450

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 377 PF00067: p450" amino acids 252 to 340 (89 residues), 28.9 bits, see alignment E=2.7e-11

Best Hits

KEGG orthology group: None (inferred from 93% identity to rpf:Rpic12D_4372)

Predicted SEED Role

"putative cytochrome p450 oxidoreductase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (377 amino acids)

>ABZR87_RS19605 cytochrome P450 (Ralstonia sp. UNC404CL21Col)
MTALNTAPPADVLQAIGHADPAPYYAELAATRPFFFDATLGWWVAAGAEAVDAVLGSAAC
RVRPAEEPVPKAVAATPTGAFFGRLVRQIDGPDHSTRKAKVMTALGRLDVSALAGHAQRH
ARTALPDAASLDAALDSDAHFRVPLATMAQTLLDDHADAPACQADIAAYLAALGPGASAG
VVAQADAAVGRLQQRFAASPFADGDNDADIANLAALLAQTYDACAGLLGNCIVALSRHAG
LTARLRTQPHAIEPFVREVLRRDAPVQNTRRFVAHDIVLLGQPLRTGDKILVVLAAANVD
GTTNPDPLRFDIDRAAPRLWTFGGGAHRCPADALATTIARETVQHLLSLPGVERWLAGLG
EVAYRPSPNARIPRFQA