Protein Info for ABZR87_RS18815 in Ralstonia sp. UNC404CL21Col

Annotation: membrane dipeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 475 PF01244: Peptidase_M19" amino acids 184 to 471 (288 residues), 156.3 bits, see alignment E=5.6e-50

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (475 amino acids)

>ABZR87_RS18815 membrane dipeptidase (Ralstonia sp. UNC404CL21Col)
MLIDWSLIATREADALHDTIVDVEGWAMPLDAAAQSADYFLLSAEAPCCGGCVSRNPAAS
IEVFAAQPMPVGDVTRVRGRLVRLHDDPAGWRYQLVDAALSPGQPAAGSPRISRRVFLAA
GAAMGLAACAPGRFANYTDAPSEASSMWAPPAGTLTVDMHSHAGRVTVSRDPKIGANRPF
LPVAEPMRAGGMQVICLAIVTDTTAVHVGAGGNRFEAFRTPEPGELYQLGMTEFARAQRL
IEREQLHVVTDAASLAAMGTQGPSVIIASEGADFLEGRIERVDEAYTQHRLRHLQLTHYR
VNELGDIQTEPPVHGGLTDFGADVVRRCNALGIVVDVAHGTYDLVKRAAATTTKPLVLSH
TALSRAPRSRSRLISADHARAVAETGGVIGVWPNAADFPNLDAMALGIKRMADVVGVAHV
GLGTDMLGFIRPPVFTGYAQLPALATALLKAGFTSGEVGQILGGNYRRVFEATVG