Protein Info for ABZR87_RS17990 in Ralstonia sp. UNC404CL21Col

Annotation: chemotaxis response regulator protein-glutamate methylesterase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 373 PF00072: Response_reg" amino acids 9 to 111 (103 residues), 79.7 bits, see alignment E=1.9e-26 PF01339: CheB_methylest" amino acids 182 to 359 (178 residues), 222.9 bits, see alignment E=2.4e-70

Best Hits

Swiss-Prot: 92% identical to CHEB_RALSO: Protein-glutamate methylesterase/protein-glutamine glutaminase (cheB) from Ralstonia solanacearum (strain GMI1000)

KEGG orthology group: K03412, two-component system, chemotaxis family, response regulator CheB [EC: 3.1.1.61] (inferred from 98% identity to rpi:Rpic_4054)

Predicted SEED Role

"Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61)" in subsystem Bacterial Chemotaxis (EC 3.1.1.61)

Isozymes

Compare fitness of predicted isozymes for: 3.1.1.61

Use Curated BLAST to search for 3.1.1.61

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (373 amino acids)

>ABZR87_RS17990 chemotaxis response regulator protein-glutamate methylesterase (Ralstonia sp. UNC404CL21Col)
MNDKRKIQVLCIDDSALIRSILKEIINSQPDMEVVGVAPDPIIARDLIKQTNPDVLTLDV
EMPKMDGLDFLEKLMRLRPTPVVMISSLTERGSEATLRALELGAVDFVAKPKLGMRDGMN
EYADQIADKIRAAARARLRPRAAAPVAAAGSASAPGAHVRADHAAAAPAPARTHFSSTEK
LIIVGASTGGTEAIKDFLLEMPPDCPGILIVQHMPAGFTTSFAKRLDGLCRIRVKEAAHG
ERVLPGHAYIAPGDMHLSLGRSGANYVTELDQGPPVNRHRPAVDVLFRSAARNAGANALG
VILTGMGKDGAVGMLEMRNAGAYNVAQDEASCVVYGMPKEAVAHGGVHEVLPLSQIGPHV
LAKLSAHGRVTRV