Protein Info for ABZR87_RS17635 in Ralstonia sp. UNC404CL21Col

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 481 transmembrane" amino acids 32 to 57 (26 residues), see Phobius details amino acids 99 to 123 (25 residues), see Phobius details amino acids 129 to 149 (21 residues), see Phobius details amino acids 158 to 181 (24 residues), see Phobius details amino acids 187 to 208 (22 residues), see Phobius details amino acids 220 to 239 (20 residues), see Phobius details amino acids 251 to 269 (19 residues), see Phobius details amino acids 289 to 312 (24 residues), see Phobius details amino acids 318 to 341 (24 residues), see Phobius details amino acids 353 to 371 (19 residues), see Phobius details amino acids 383 to 405 (23 residues), see Phobius details amino acids 426 to 445 (20 residues), see Phobius details amino acids 451 to 473 (23 residues), see Phobius details PF07690: MFS_1" amino acids 37 to 431 (395 residues), 172.7 bits, see alignment E=1.1e-54 amino acids 293 to 470 (178 residues), 50 bits, see alignment E=2.2e-17 PF00083: Sugar_tr" amino acids 65 to 198 (134 residues), 25.8 bits, see alignment E=5.1e-10

Best Hits

KEGG orthology group: None (inferred from 89% identity to rsl:RPSI07_1605)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (481 amino acids)

>ABZR87_RS17635 MFS transporter (Ralstonia sp. UNC404CL21Col)
MTPLDSAAPGASATITAALPTTQTDTASPWPVFWIASVAVFLVSMDGTMLFAAFSALRAG
FPHATAADLSWVLNAYTVAYAATLIPSGGLADKHGRKKVFLIGVALFLAASVACGLSPSV
GWLVAARVLQAVGAALLTPASLSLVLAAFPVSKRAVAISLWGAVGALAAAVGPSLGAFVI
ASIGWQWAFYLNVPLGLTAMWRGATLLVETRQHGTKRPLDLFGMGLLMIGTAALALSIVQ
SESPGWSRDELLGIAAIGLACIVGFVAWARVAQAPLVDLTLFRNPTYRYVNLATLSFGTA
FSMMFFGFFFYMKSIWHYSLPVAGLAITPGPLLVIPVAMLSGRIASRHGHRPLLVAGSVL
YASSAVWFLLVPGLTPAYLTHWLPGMLLSGVGVGMVLPSLSGAAVSHLPAEHYAVGGAIN
QAIRQIGSVMGVALTVLLLGGTGLQRADFNALYLCHMSLALLTAVLCLPVNTLPRALVRS
R