Protein Info for ABZR87_RS17380 in Ralstonia sp. UNC404CL21Col

Annotation: cyanophycin synthetase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 886 TIGR02068: cyanophycin synthetase" amino acids 7 to 869 (863 residues), 1156.9 bits, see alignment E=0 PF18921: Cyanophycin_syn" amino acids 30 to 140 (111 residues), 119.3 bits, see alignment E=2.6e-38 PF08443: RimK" amino acids 218 to 318 (101 residues), 24.1 bits, see alignment E=7.4e-09 PF02786: CPSase_L_D2" amino acids 219 to 305 (87 residues), 31.1 bits, see alignment E=5e-11 PF13549: ATP-grasp_5" amino acids 222 to 287 (66 residues), 29.5 bits, see alignment 1.4e-10 PF08245: Mur_ligase_M" amino acids 491 to 705 (215 residues), 38.6 bits, see alignment E=3.5e-13 PF02875: Mur_ligase_C" amino acids 730 to 806 (77 residues), 41.9 bits, see alignment E=3e-14

Best Hits

KEGG orthology group: K03802, cyanophycin synthetase [EC: 6.-.-.-] (inferred from 97% identity to rpf:Rpic12D_4081)

Predicted SEED Role

"Cyanophycin synthase (EC 6.3.2.29)(EC 6.3.2.30)" in subsystem Cyanophycin Metabolism (EC 6.3.2.29, EC 6.3.2.30)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 6.-.-.-, 6.3.2.29, 6.3.2.30

Use Curated BLAST to search for 6.-.-.- or 6.3.2.29 or 6.3.2.30

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (886 amino acids)

>ABZR87_RS17380 cyanophycin synthetase (Ralstonia sp. UNC404CL21Col)
MKKKDIEILDVMSLRGPNMWTYRPVLEAWVDIGELEDFPSNTIPGFYERLSTWLPTLIEH
RCSPGVRGGFLMRLKEGTWPGHILEHVTLELQNLAGMPGGFGKARETPVRGVYKVIVRAW
HEDVTRAALFAARDLVMAAIEDRPYDVDAAVETLRDLVDEHCLGPSTACIVDAADDRNIP
SIRLSDGNLVQLGYGARQRRIWTAETDRTSAIAESISRDKDLTKSLLQSCGVPVPEGRMV
DSAEDAWDAAEDIGVPVVVKPYDGNHGRGVFTNLMTREEVETAYAVAIEEGNGVIVERFV
SGNEHRLLVVGGRVAAAAMGETASVVGDGTSTIEELIESQINSDPRRGNTEEHPLNCVRL
DSAARLELKRQGYADGSAVPPAGRSVLIQRNGNVAFDVTDRVHPSVAAHASLAARVVGLD
IAGVDLVADDISRPLDEQRGAIVEVNAGPGLLMHIRPAQGEPRPVGRAIVDHLFSGKDGA
QDDGRIPIVGITGTNGKTIVAKLVAQMLQLSGRHTGLGCSDGLYLDRRQVESGARTDRAA
WDACHRILMNRAVEAAVFESDSGMILSQGLPYDRCQVGVVTNFGKPDHLGDFYVEDEDRM
YSVLRTQIDVVLKTGVGVLNAADARLVEMADLCDGDVIFFALSGDLPAITEHRAAGKRAV
FVRDGKVVLATGPTELALADVSSIPLTYAGRVPFQLENVLAAVATGWALGISNDLMRAGI
LTFDVGQVDVPGRFTLFQHHGATIVVDDAHNASALEALATALDNFPAERRTLVFGAGLQR
RDEDLIAQGTVIGQTFDRVLLCEDASVKRTDAEFDRQARALLKQGLQAGGRVAEVVVEGA
KRRDVVDAALSQLTAGDLLVLQCDECAIEGTVEQVHQWMGRAESQN