Protein Info for ABZR87_RS17055 in Ralstonia sp. UNC404CL21Col

Annotation: sulfite exporter TauE/SafE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 260 transmembrane" amino acids 14 to 41 (28 residues), see Phobius details amino acids 48 to 68 (21 residues), see Phobius details amino acids 74 to 94 (21 residues), see Phobius details amino acids 104 to 122 (19 residues), see Phobius details amino acids 150 to 176 (27 residues), see Phobius details amino acids 185 to 205 (21 residues), see Phobius details amino acids 211 to 232 (22 residues), see Phobius details amino acids 239 to 257 (19 residues), see Phobius details PF01925: TauE" amino acids 13 to 254 (242 residues), 162.5 bits, see alignment E=7.1e-52

Best Hits

KEGG orthology group: K07090, (no description) (inferred from 93% identity to rpi:Rpic_3904)

Predicted SEED Role

"putative membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (260 amino acids)

>ABZR87_RS17055 sulfite exporter TauE/SafE family protein (Ralstonia sp. UNC404CL21Col)
MASHAVLTGLVNLLLGMGLGVAGGLLGIGGGLIAIPVLGYLYGMDQHLAQGTALVMIAPN
VLIGFWRYHQRHPVHLRSVALICVFSMAATYVAARFAAGLDAHLLHTAFAVFLIALAVYF
ASQLKEKPNAGDATHAAPRAMPAAALPLMGVASGAMSGIFTVGGGLVVVPALVTFFGMPQ
TRAQGMALALVVPGSLIALATYAHAGHVDWGTGIPLAAGGIASVSWGVALAYRFSARRLR
LAFCAVLLGTALMMLLVKPA