Protein Info for ABZR87_RS16185 in Ralstonia sp. UNC404CL21Col

Annotation: dCTP deaminase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 188 TIGR02274: deoxycytidine triphosphate deaminase" amino acids 4 to 187 (184 residues), 166 bits, see alignment E=3.5e-53 PF00692: dUTPase" amino acids 82 to 183 (102 residues), 25.1 bits, see alignment E=6e-10

Best Hits

Swiss-Prot: 99% identical to DCD_RALPJ: dCTP deaminase (dcd) from Ralstonia pickettii (strain 12J)

KEGG orthology group: K01494, dCTP deaminase [EC: 3.5.4.13] (inferred from 98% identity to rso:RSc2366)

MetaCyc: 68% identical to dCTP deaminase (Rickettsia prowazekii Madrid E)
dCTP deaminase. [EC: 3.5.4.13]

Predicted SEED Role

"Deoxycytidine triphosphate deaminase (EC 3.5.4.13)" (EC 3.5.4.13)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.4.13

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (188 amino acids)

>ABZR87_RS16185 dCTP deaminase (Ralstonia sp. UNC404CL21Col)
MSIKSDKWIRRMAEQHGMIEPFEPGQVRESEGRRIVSYGTSSYGYDIRCADEFKIFTNIN
STIVDPKNFDEKSFVDFKGDVCIIPPNSFALARTMEYFRIPRTVLTVCLGKSTYARCGII
VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDEECETSYKDRGGKYQGQ
HGVTLPKT