Protein Info for ABZR87_RS16000 in Ralstonia sp. UNC404CL21Col

Annotation: quinoprotein relay system zinc metallohydrolase 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 315 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details TIGR04558: quinoprotein relay system zinc metallohydrolase 1" amino acids 27 to 313 (287 residues), 392.4 bits, see alignment E=4.9e-122 PF00753: Lactamase_B" amino acids 55 to 241 (187 residues), 34.2 bits, see alignment E=1.3e-12

Best Hits

KEGG orthology group: None (inferred from 92% identity to rpi:Rpic_2500)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (315 amino acids)

>ABZR87_RS16000 quinoprotein relay system zinc metallohydrolase 1 (Ralstonia sp. UNC404CL21Col)
MSRRHPWLGLLLCLAMLSALARAAGPDYHLVPRAVAPDVWVLEGANADFSARNGCNIINT
GFIDTGDGVLVINTGPSLQYGEQQREAIRTVTSAPVRWVFNLNLHPDYFFGNQAYADVGA
QALPGTIAGAQREGAAYADNLYRICGAWMQNTVSTPPGTPLSPGARTMGRHRIDLIRLDG
HTDDDLVVVDRTSGVVFAGGIAFRDRIPTTPHANIAHWLASLDRLQKIVADSGARVLIPS
HGPALGNADAIAQTRQYLQWLDARMRRAATEGRDLAEVIAMPVDAPYAQWGGMPAEYTRN
VTRFYPGYEHAALAP