Protein Info for ABZR87_RS15560 in Ralstonia sp. UNC404CL21Col

Annotation: carboxyl transferase domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1103 PF00289: Biotin_carb_N" amino acids 3 to 110 (108 residues), 126.3 bits, see alignment E=2.7e-40 PF02786: CPSase_L_D2" amino acids 115 to 327 (213 residues), 195.7 bits, see alignment E=2.6e-61 PF02785: Biotin_carb_C" amino acids 343 to 453 (111 residues), 96.2 bits, see alignment E=4.5e-31 PF00364: Biotin_lipoyl" amino acids 496 to 562 (67 residues), 58.3 bits, see alignment 1.9e-19 PF01039: Carboxyl_trans" amino acids 610 to 1077 (468 residues), 260.1 bits, see alignment E=1.4e-80

Best Hits

KEGG orthology group: None (inferred from 72% identity to reu:Reut_A2997)

Predicted SEED Role

"Biotin carboxylase (EC 6.3.4.14)" (EC 6.3.4.14)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 6.3.4.14

Use Curated BLAST to search for 6.3.4.14

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1103 amino acids)

>ABZR87_RS15560 carboxyl transferase domain-containing protein (Ralstonia sp. UNC404CL21Col)
MTFRKLLIANRGEIAIRIARAAATIGLPSAALYSEDDRDALHPLRADEAVPLPGTGPRAY
LDGAAILDAARAVGADAVHPGYGFLSEGAAFARQCAEAGVQFIGPPPRVLELFGDKARAR
ALAHEAGIPIVSGTQGATTLEEARAFFATLPPSHGMMIKAVSGGGGRGMRAVHDAQAIAD
AYARCISEATAAGGGGDVYVEALVPAPRHIEIQIVADAHGHVAHLGERECSLQRRHQKLI
EIAPSPALNDALRARIAEAAVTLAKAARYSGIGTFEFLVEGAGTPHTTFYFMEANPRVQV
EHTVTEMVTGIDLVVTQLALAQGASLADVGLAQPIAPRGHAVQVRINAETLDASGQPHPS
TGMLTAFEPPNGPGVRVDTCGYAGYRPNPRFDSLLAKLIVHAPHGTYAQTLTQTYRALCE
FRIEGLATNKRLLQDLLRDADVQANAVHTQFLDAKLADLAAGNGEAHPALHATSVATPDL
TPATSFLDELPDDAEVLTAPMDGALIQITAQAGAAVARGEVLAVIEAMKMEHVVTAPAAG
RVLQVCAQSGATVREGQPLAVLHPADAQHDTAAANAEIDLDHIRPDLQAVIERHAFGLDA
NRPEAVARRRKTGQRTARENIAHLCDADSFIEYGALAIAAQRQRRALADLIRSTPADGII
TGIGTVNGAHFPDQDARCMVLAYDYTVLAGTQGTFNHKKTDRALELAQQWKMPVVLFAEG
GGGRPGDTEKRGVSGLDCPTFIHFARLSGLVPTVGIVSGRCFAGNAALLGCADVIIATRD
ATIGMGGPAMIEGGGLGVYAPEEVGPVNVQAPNGVIDVLVENETEAVDAARRYLSYFQGP
LADWEAGDVRHLRHVIPENRMRSYDMRAVIDALADTDSVLELRQAFGVGIITALIRIEGR
AFGCIANNPRHLGGAIDSAAADKASRFMQLCNAFDLPIVSLCDTPGFMVGPEAEKTATVR
HVSRMFVTAGNLRVPFFTIVLRKGYGLGAMAMAAGGFRAPLFTASWPSGEFGGMGIEGAI
RLGYRKELEAVEDPAEREALFRKMVDAAYEEGRALNIASYLEIDAVIDPADTRRWLLRGL
QSAPPAPPRHTRDPATRGFIDTW