Protein Info for ABZR87_RS15500 in Ralstonia sp. UNC404CL21Col

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 355 PF13439: Glyco_transf_4" amino acids 14 to 166 (153 residues), 63.2 bits, see alignment E=6.4e-21 PF00534: Glycos_transf_1" amino acids 178 to 293 (116 residues), 40.4 bits, see alignment E=4.6e-14 PF13692: Glyco_trans_1_4" amino acids 209 to 312 (104 residues), 39 bits, see alignment E=1.9e-13

Best Hits

Swiss-Prot: 48% identical to Y986_BURTA: Probable transglycosylase BTH_I0986 (BTH_I0986) from Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)

KEGG orthology group: None (inferred from 96% identity to rpi:Rpic_2402)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (355 amino acids)

>ABZR87_RS15500 glycosyltransferase (Ralstonia sp. UNC404CL21Col)
MNVGISCNALGYSGGSERYAMDLVRGLHERAIRPVFFAKMVDKALPEYRQVKAVALPTRK
LPGKLNDHAFGWLVRYLAKREHIDLMIGCNRTGASDIAICGGTHVGYLKSFSKEPAFWDR
QQIALERRDYVRSHVVVAHSRLMAQEVLDYYDIPADKVKTVYPPVSETKFSPVDEAERQR
LRDELGFAKDRVTFVFPSSSHKRKGYPLLEAFFSKTDLPVQLAVIGRPVSSSSPNIRYLG
YRKDIENVYRAADYTILASHYEPFGLIGVESVLCGTPAVLAANIACTEVISEDGAPTFDL
DDPATLGRTIEAAVARVHAGQARLSNPREHLRYDPGITAHIDALLALAPGAGTLR