Protein Info for ABZR87_RS14395 in Ralstonia sp. UNC404CL21Col

Annotation: ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 773 PF07728: AAA_5" amino acids 316 to 443 (128 residues), 27.6 bits, see alignment E=2.6e-09 PF00004: AAA" amino acids 317 to 449 (133 residues), 54.8 bits, see alignment E=1.4e-17 amino acids 565 to 686 (122 residues), 102.5 bits, see alignment E=2.4e-32 PF01057: Parvo_NS1" amino acids 560 to 586 (27 residues), 19.5 bits, see alignment (E = 4.1e-07)

Best Hits

KEGG orthology group: None (inferred from 98% identity to rpi:Rpic_2115)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (773 amino acids)

>ABZR87_RS14395 ATP-binding protein (Ralstonia sp. UNC404CL21Col)
MDEANLNMDDADDDGTFVPTGGRQPQAPILSSLDSMCAQFALRTVCAMGLRFNLRTNIND
ILTVCAPELIWPVTVIQRLQRFLSARCADMPGWRAVGKLDLPTFMDRHGQWSSAFDEGSL
FYYLDEYVKHHAKDMFTVFGASCDALGERLSGERVLLVGNIDMLARVLGLPPHERALLLF
ASLVKYKRDLRAVMVDCKVAHSQEAFQLLANLAGASTAEVAASLRPGSRLETLGLIEPPL
PENSVTDLGDLMRISDRLLHVLLGDYTSEADMMAVFTRPAPATMLSQSDYPHVETDARYL
TALLENASQQRAAGVNILLYGAPGTGKTELARVLARDAGCELYEVDCLDKDGNSLTGKDR
YRSLQVSQAFLRGRPGAVLLFDEVEDVFPGPTRELMSLFGHEEPRGSVNGKAWVNQTLEQ
NPVPVIWVSNSIRQIDPAYLRRFQFHLELKVPPPTVRESIIRKHLEGLEVSDAFMAKLAA
RKTLTPAQIDSAARFARLTQPAMEESAESLIERQLDHADQAMGLRPEVQAHRVVTEYKLD
YLNLETRFSVERIIEALRARRRGTLCFYGPPGTGKTVLAEHIAAQLDMPLMIRRASDLMS
KYVGETEQQIAAMFARAEEERALLLLDEADSFMQSRQGAVRNYEVSEVNEMLQGMERFDG
IFVCTTNLFDRIDEAALRRFAFKIRFKPLVRAQREQMFIAEALGGKAEALKPVWREMLAS
LDMLTPGDFAVVKQQSVLLGETLDPEAFLAQLRQEHSIKPELRERRSIGFTPR