Protein Info for ABZR87_RS13835 in Ralstonia sp. UNC404CL21Col

Annotation: DUF2069 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 130 transmembrane" amino acids 12 to 36 (25 residues), see Phobius details amino acids 42 to 61 (20 residues), see Phobius details amino acids 68 to 85 (18 residues), see Phobius details amino acids 96 to 115 (20 residues), see Phobius details PF09842: DUF2069" amino acids 19 to 117 (99 residues), 121.1 bits, see alignment E=1.1e-39

Best Hits

KEGG orthology group: None (inferred from 91% identity to rpf:Rpic12D_1666)

Predicted SEED Role

"Probable transmembrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (130 amino acids)

>ABZR87_RS13835 DUF2069 domain-containing protein (Ralstonia sp. UNC404CL21Col)
MTSSNNAVTGSRALALTSAGSLIALIILCAAWELWLAPVRPGGSWLALKALLLAWPLPGV
LRRNRYTMQWASMFILLFFTEGIVRATSDVGLSRSLAWGEVALSVVFFSATIFYLRPFKR
AAKARASQST