Protein Info for ABZR87_RS12525 in Ralstonia sp. UNC404CL21Col

Annotation: iron-containing alcohol dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 382 PF00465: Fe-ADH" amino acids 9 to 373 (365 residues), 350.1 bits, see alignment E=1.3e-108 PF13685: Fe-ADH_2" amino acids 13 to 107 (95 residues), 30.8 bits, see alignment E=2.5e-11

Best Hits

KEGG orthology group: None (inferred from 99% identity to rpi:Rpic_1435)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (382 amino acids)

>ABZR87_RS12525 iron-containing alcohol dehydrogenase (Ralstonia sp. UNC404CL21Col)
MALIFYLTHVHLGFGTVNELKSECARVGIRRPMIVTDKGVAAAGLAQRAIDATGGLPVTV
FDETPSNPTEAMVLKATAQYKDTGCDGLIAIGGGSSIDLAKGIAIAATHPEPLTTYATIE
GGSTKITEAAAPLIAIPTTAGTGSEVARGAIIILEDGRKLGFHSWHLLPKSAICDAELTL
GLPPALTAATGMDAIAHCIETFLAPAFNPPADGIALDGLERAWANIERATRDGADRDARL
NMMSASMQGAMAFQKGLGCVHSLSHPLGGVKVDGKTGLHHGTLNAVVLPAVLRFNETAET
VVRDNRYARMRRVMNLPAGADLAQAVHDLTARLGLPTGLRQMGVPEDALEHVVEGALLDH
CHKTNPRIATADDYRRMLAESM