Protein Info for ABZR87_RS10825 in Ralstonia sp. UNC404CL21Col

Annotation: CaiB/BaiF CoA-transferase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF02515: CoA_transf_3
  • amino acids 6 to 374 (369 residues), 435.4 bits, E=9.7e-135

Best Hits

Swiss-Prot: 32% identical to FCTA_STRCO: Formyl-CoA:oxalate CoA-transferase (frc) from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)

KEGG orthology group: K07749, formyl-CoA transferase [EC: 2.8.3.16] (inferred from 98% identity to rpf:Rpic12D_1133)

Predicted SEED Role

"L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16)" (EC 2.8.3.16)

MetaCyc Pathways

• oxalate degradation II (1/3 steps found)

Isozymes

Compare fitness of predicted isozymes for: 2.8.3.16

Use Curated BLAST to search for 2.8.3.16

Protein Sequence (402 amino acids)

>ABZR87_RS10825 CaiB/BaiF CoA-transferase family protein (Ralstonia sp. UNC404CL21Col)
MPTQVLQDIRVLELGQLIAGPFAAKTLADFGAQVIKIEPPGQGDPLRKWRMLHEGTSVWW
EAQSRNKQSVCVDLRVPEGQEVVRKLAAEADVLIENFRPGTMEKWGLSYEALSAINPKLI
MLRVSGYGQTGPKRDEPGFAAIAEAMAGLRYLTGEPGRPPARAGLSLGDTIAGLHGALGV
LLALYERDARGGKGQVIDVALYESVFNLTESLLPEYSVFGAIRQPAGGALPGIAPSNAYR
CAGGEYVLIAANGDNIFRRLMQHMGRQDLADDPGLARNDGRAARAEEIDAAINAWTSTLP
IAEVLAALHAAEVPSGPIYTIADIAADPHYRARGVIETVRAQSGIEVEMPGVVPKLSATP
GAVQASAPRLGQHTRDVLRSHGLTDAQIDALVSQGIVAEAKS