Protein Info for ABZR87_RS10325 in Ralstonia sp. UNC404CL21Col

Annotation: glycoside hydrolase family 31 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 803 PF13802: Gal_mutarotas_2" amino acids 29 to 218 (190 residues), 120.7 bits, see alignment E=1.4e-38 PF01055: Glyco_hydro_31_2nd" amino acids 265 to 592 (328 residues), 305.9 bits, see alignment E=6.2e-95 PF21365: Glyco_hydro_31_3rd" amino acids 601 to 687 (87 residues), 81.9 bits, see alignment E=5.6e-27

Best Hits

KEGG orthology group: K01187, alpha-glucosidase [EC: 3.2.1.20] (inferred from 98% identity to rpf:Rpic12D_1013)

Predicted SEED Role

"Alpha-glucosidase (EC 3.2.1.20)" in subsystem D-Galacturonate and D-Glucuronate Utilization or Maltose and Maltodextrin Utilization (EC 3.2.1.20)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (803 amino acids)

>ABZR87_RS10325 glycoside hydrolase family 31 protein (Ralstonia sp. UNC404CL21Col)
MSMLNPPRFEVQAHEGNRLRLASSAGAAIELFVLEEDIIRVLVLPQGDLRGPATWSIAPG
GDDTPLEGRDRRDLSGFALPPFALHSDADTLRVETSKIRLSVALAGGFCTWQIRGAGGWQ
TVLNDRPTQAYNFGYWDEQVYHYVRREPGEMYFGLGERAGDMNRAHQRYEMRNIDAMGYS
ARTTDPLYKHIPFYVTWQPENRTGFGLFYDTLSDCSFDMGRELDNYHGLYRYFVAPHGDL
DYYFIASPDTPLDATRRFTWMTGRPAWMPKWGLGYSGSTMTYTDAPNAQEQMAEFIKGCR
EHDILCDSFHLSSGYTSIGPKRYVFNWNTDKFPDARGFVQSYLDAGIRLCPNIKPCLLRD
HPKFEEAREAGLLICDANGEPAWVQFWDEVGAYLDFTNPKTLDWWKANVKSALLEYGMAS
TWNDNNEFEVWTPDAFAHGFGKKAPIREAKVLHTMLMMRASREAQLEFAPQHRPFLVSRS
GGVGMQRYVQTWSGDNYTSWETLRYNLKMGLGLALSGVSNIGHDIGGFAGPAPSPELLVR
WVAFGVFLPRFSIHSWNDDKTVNEPWMYPQVTSQIASLIKLRYRLIPYLYELLWQSTQAY
EPVLRPTFAEFPHDRRCYAECDDMMIGSSLLVAPTVDEGQTERTVYLPAGARWVSYWSGE
AFEGGQTVTLPSPWDQPVMLIREGGVIALNVAEQHFDRRADQRGFLVVPMQGVGETAGGS
VEDDGETEAWRNGEQGRWSVRAVSDAQSITLHVSREGKMPTPADTVEIHLPAGDARPVQT
PHARVLETVVVGGWRRLTLQLPA