Protein Info for ABZR87_RS10240 in Ralstonia sp. UNC404CL21Col

Annotation: elongation factor P maturation arginine rhamnosyltransferase EarP

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 397 TIGR03837: conserved hypothetical protein, PP_1857 family" amino acids 7 to 393 (387 residues), 504.7 bits, see alignment E=8.4e-156 PF10093: EarP" amino acids 7 to 393 (387 residues), 500.8 bits, see alignment E=1.3e-154

Best Hits

KEGG orthology group: None (inferred from 91% identity to rpf:Rpic12D_1000)

Predicted SEED Role

"FIG00974036: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (397 amino acids)

>ABZR87_RS10240 elongation factor P maturation arginine rhamnosyltransferase EarP (Ralstonia sp. UNC404CL21Col)
MRTITSWDLFCRVVDNYGDIGVCWRLARQLVQEHGHTVRLWVDDLRSFEKICPAVDAQAD
AQRVSGVDIRQWADDAQVANLLAADAHPGLHDVVIGAFACAVPEPVLTLMAERASEGVAP
VWLNLEYLSAENWVAEHHAMQSPHLRLPLVKHFFFPGFARNTGGVLRESHLGAQRETFEA
SPAAHQALWHRLGVDDLVRHNPDALRVSLFAYANPALATLVSQWEASPQPVICLVPEGLA
AQQIAELMGDAGAAKTGARWTRGNLSVAVVPFVPQEHYDPLLWACDINFVRGEDSFVRAQ
WALKPFVWHIYPQSDDVHLVKLDAFLARYTPALTEADAKALISFWHAWNGAPASLDWNEF
VAVTPRLRVRAVTWEQSLMQLGDLAANLVAFCEKQVK