Protein Info for ABZR87_RS09570 in Ralstonia sp. UNC404CL21Col

Annotation: alkaline phosphatase D family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 539 signal peptide" amino acids 1 to 37 (37 residues), see Phobius details PF16655: PhoD_N" amino acids 56 to 146 (91 residues), 80.6 bits, see alignment E=1e-26 PF09423: PhoD" amino acids 164 to 520 (357 residues), 319.6 bits, see alignment E=2.4e-99

Best Hits

KEGG orthology group: K01113, alkaline phosphatase D [EC: 3.1.3.1] (inferred from 96% identity to rpi:Rpic_0798)

Predicted SEED Role

"Phosphodiesterase/alkaline phosphatase D"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.3.1

Use Curated BLAST to search for 3.1.3.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (539 amino acids)

>ABZR87_RS09570 alkaline phosphatase D family protein (Ralstonia sp. UNC404CL21Col)
MSDQPIFKPTRRTLIKGLVSASGTALLGSRMAEVLAQGAAPAVVTSERLRPQVPGGVMSG
DITADSAIVWSRTDRPARMIVEYSTDAAFKTVARRVGPAALESNGLTARVDVTGLPAGAD
LFYRVRFQDLVHDKVFSEPVAGRFRTAPVQANRPICFVFSGDEAGQGWGINERFGGYRLY
EAMRRESPDFFIHSGDQIYADGPIQAEVKLPDGSLWTNLVTEAKSHVAQTLDDYRGAFAY
NQLDKKKRAFSAEVPFLVQWDDHEVRNNWYPGQQIGPEEKRYQERSASLLAARAKQAMFE
YNPFRFNPIDPEQIYRAFQYGPLLDVFMLDERSYRGRNSPNRQTRLDADSAFLGPAQAAW
LKQSLKQSKATWKVIASDMPISLVVPDLNPDVPKGTYEAWANADDGAPSGRELELAEILR
FIKQENIQNVVWVTADVHYAQATYYHPSRAKFTEFKPFWEFVGGPINAGTFGPNEVDQTF
GPDVRYVSIPKDNPQNQSPAALQQYYGRAKIDPATRTMHVSLHDLDGKSVWEVKLDPEA