Protein Info for ABZR87_RS08705 in Ralstonia sp. UNC404CL21Col

Annotation: glycosyltransferase family 4 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 410 transmembrane" amino acids 84 to 102 (19 residues), see Phobius details amino acids 108 to 127 (20 residues), see Phobius details PF13439: Glyco_transf_4" amino acids 23 to 203 (181 residues), 58 bits, see alignment E=2.6e-19 PF13579: Glyco_trans_4_4" amino acids 24 to 200 (177 residues), 85.2 bits, see alignment E=1.3e-27 PF00534: Glycos_transf_1" amino acids 221 to 380 (160 residues), 50.6 bits, see alignment E=3.3e-17 PF13692: Glyco_trans_1_4" amino acids 223 to 365 (143 residues), 45.5 bits, see alignment E=2e-15

Best Hits

KEGG orthology group: None (inferred from 74% identity to ajs:Ajs_3033)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (410 amino acids)

>ABZR87_RS08705 glycosyltransferase family 4 protein (Ralstonia sp. UNC404CL21Col)
MGVRVLLLTQWFDPEPTFKGMVFARELVRQGFEVEVLTGFPNYPGGRLYPGYRMRWLQRE
TIDGVHVTRVPLYPSHDQSALRRVLNYVSFAAFALLHGLFSVRRCDVIYAYHPPLTVGLA
ASFIRLFRRIPVVYDIQDMWPDTLRATGMIGNPTALDVVEKVCRWVYRRVDHIVVLSPGF
KRLLGQRGVPEEKIDIICNWADEASLAAPVGALPTNFPGPDRFRVVFAGNMGKAQALGTV
LHGAALLQQRGSKVSFVFVGGGVDVDTLKAQAAKLALDNVVFIPPVPMSEVGTLLNEADA
LLVHLRRDPLFQITIPSKTQAYMAVGKPLLMAVDGDAADLVRQSGGGIVATSEDAQSIAN
AAQSLAMLAPDDLAAMGRRAQEYYREQLALRVGVSRFGAIFSKLAVSRSR