Protein Info for ABZR87_RS06675 in Ralstonia sp. UNC404CL21Col

Annotation: YifB family Mg chelatase-like AAA ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 510 TIGR00368: Mg chelatase-like protein" amino acids 8 to 504 (497 residues), 597 bits, see alignment E=1.4e-183 PF13541: ChlI" amino acids 21 to 132 (112 residues), 149.7 bits, see alignment E=1e-47 PF01078: Mg_chelatase" amino acids 200 to 405 (206 residues), 326.4 bits, see alignment E=1.9e-101 PF07728: AAA_5" amino acids 224 to 363 (140 residues), 41.2 bits, see alignment E=5.2e-14 PF00493: MCM" amino acids 298 to 363 (66 residues), 27.9 bits, see alignment E=3.7e-10 PF13335: Mg_chelatase_C" amino acids 413 to 504 (92 residues), 97.5 bits, see alignment E=1.6e-31

Best Hits

KEGG orthology group: K07391, magnesium chelatase family protein (inferred from 98% identity to rpi:Rpic_0194)

Predicted SEED Role

"MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (510 amino acids)

>ABZR87_RS06675 YifB family Mg chelatase-like AAA ATPase (Ralstonia sp. UNC404CL21Col)
MSLAVLRSRALSGIDAPAVSVEVHLANGLPSFTIVGLPDTEVKESKDRVRAAIQNSRFEF
PARRITVNLAPADLPKESGRFDLAIALGILAASRQIPHTHLDAHEFAGELSLSGDLRPIR
GALAMAYALSRNPASADGDAPLARAFVLPAENAAEAALVSGTKVLPARTLIEVCDHLSAP
DRKLAPALPAPVDVDIRYPDLADVRGQPQARRALEVAAAGGHSMLMIGPPGTGKSMLAQR
FPGLLPDMSDDEALSAAAVMSLTTRGFDARRWKVRPFRSPHHTASAVAMVGGGNTPRPGE
ISLAHQGVLFLDELPEFERRVLEVLREPLETGHITISRAAHQTDFPASFQLIAAMNPCPC
GYRGHPLRACRCTPDQVERYQARISGPLLDRIDVQIEVPTPSQEELLDGPPGEPTVNVAQ
RVAAAHARQLARQGKRNALLGGHEIDLHCSRTDAADGLLRHAMTRFSWSARAYARVLKLA
RTIADLAGDEQIDAAHVGEAIQYRRGVKAD