Protein Info for ABZR87_RS05400 in Ralstonia sp. UNC404CL21Col

Annotation: DGQHR domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 777 PF14072: DndB" amino acids 226 to 389 (164 residues), 41.8 bits, see alignment E=4e-15 TIGR03187: DGQHR domain" amino acids 227 to 510 (284 residues), 145.1 bits, see alignment E=1.8e-46

Best Hits

KEGG orthology group: None (inferred from 58% identity to mms:mma_0577)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (777 amino acids)

>ABZR87_RS05400 DGQHR domain-containing protein (Ralstonia sp. UNC404CL21Col)
MKLLENIQRSEELRSLARQASRSYEVKSTNLKNIGREEADGWSVLRKSKTSARMQREKTG
FRSARDRVWTLLFRLSFGQLSTHEGCVLLLDQRAAESPTRTLDVVAIDEEVVVAVDILRP
LESGRIDLQGMISSILGIRDRLTRSVAAQFPSEQKRQVVLAIYVSSSNVSEEDREVAKKS
NVVLIDDSDLAYYENLVLHLGAAAKYQFLADMLPGKTIAGLEIKVPAVKTKMGRNTCYTF
PISPDYLLKIAYVSHRTKGKASDINTYQRMIARSRLNKIRQYISEHGVFPTNIVLNIDKR
FINFQRSKQENGAADSDASGTIGWLHLRPAYKSAWVIDGQHRLFAYSGHPFAKSGHLSVL
AFEGLPPSSQARLFVDINAKQKSVKPSLLQELFAELNWDADSFELRSQAIVSKAVQVLDK
DKTSPLFNRIQTADTSKDFIRCISLASLFKAIERSEFFSGKSRKLDGQEWGPLWADNNEA
TLNRTVSTLKFWLNTARSGAPEWWDLGSGDGGGFAMNDSVTACINVLRSVLTHLDKSGSK
LRALSNNELNSLLSPYARSLAAYFGTFSTEDRKRYRELRGVQGQTARTRRCQAAIRAEIP
EFNPPGLDDFIQREKTETNLQAKTIIDDIEVQLKEFVVEELRQEFRDSDTAWWQDGVPKP
VRLEVMSRKERDDSKRGSIEAYFDLIDYRVIAMNNWELFKNALGVGGGNKEKQTKWMVDV
NEMRNQVAHASSGVVLSIEALTKLQGYQEILTRNINAAISVDTSHEEADTDEGFEEA