Protein Info for ABZR87_RS02535 in Ralstonia sp. UNC404CL21Col

Annotation: phospholipid-binding protein MlaC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 211 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF05494: MlaC" amino acids 37 to 199 (163 residues), 176.2 bits, see alignment E=2.5e-56

Best Hits

KEGG orthology group: K07323, putative toluene tolerance protein (inferred from 95% identity to rpf:Rpic12D_2889)

Predicted SEED Role

"Uncharacterized ABC transporter, auxiliary component YrbC"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (211 amino acids)

>ABZR87_RS02535 phospholipid-binding protein MlaC (Ralstonia sp. UNC404CL21Col)
MLNKLLRSLFVGLTLTAAVAAAPVHAQEADAQATVKTAVDDVLTTIKSDPELRSGNMAKV
FQLVDQKIVPRADFKRTTQIAMGRFWTQASPEQQQQIQEGFKTLLIRTYAGALSNVKNQT
VSYKPFRAAADDTDVVVRSTVNNNGEPVALDYRLEKTAGGWKVYDINISGLWLSETYKNQ
FADVISKRGGVAGLVSFLNERNAQLEKGPAK