Protein Info for ABZR87_RS02030 in Ralstonia sp. UNC404CL21Col

Annotation: molybdopterin oxidoreductase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 698 PF04879: Molybdop_Fe4S4" amino acids 4 to 58 (55 residues), 50.6 bits, see alignment 2.3e-17 PF00384: Molybdopterin" amino acids 61 to 479 (419 residues), 130.5 bits, see alignment E=1.2e-41 PF01568: Molydop_binding" amino acids 578 to 687 (110 residues), 86.8 bits, see alignment E=1.5e-28

Best Hits

KEGG orthology group: None (inferred from 99% identity to rpi:Rpic_3106)

Predicted SEED Role

"Anaerobic dehydrogenases, typically selenocysteine-containing" in subsystem Anaerobic respiratory reductases

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (698 amino acids)

>ABZR87_RS02030 molybdopterin oxidoreductase family protein (Ralstonia sp. UNC404CL21Col)
MSTQVIRAACPHDCPDTCALLVTVEDGRATRVQGDPDHPTTAGVLCTKVNRYAERTYHPN
RLLAPMKRVGAKGEGKFEPISWDEAIDTIATRLGDIAARNPEAILPYSYAGTMGLVQGES
MAARFFHKLGASLLDRTICASAGATALRYTYGASLGMDIEHVQDAKLILIWGANPIASNL
HFWTRAQEAKRRGATLVAIDPYRSLTAEKCHRHLAVRPGTDAALALAMIHVLIRDDLLDH
DYIANHTLGFEALRERAQQYTPEYAATLCGVDAADIEWLAKLYGTTVVRDKQPAAIRLNY
GMQRAHGGGQGVRAVACLPSLVGAWRDAAGGLQLSTSGFFPIDNAKLQRPDLLPSWPALP
RTINMSTIGDALLHAGDASFGPKVEAVVVYNSNPVAVAPDSRKVAAGFAREDLFTVVLEH
FQTDTADYADILLPATTQLEHVDVHKAYGHTYVLANNAAIAPMGQSLPNTEIFRRIAKRM
GFNDACFADSDDDIASQAVRRDDPAAAHIDWATLKRDGWQKLAHPAAPLAHGGYRTPSGR
CEFYSEQMAKDGLDPLPGYVPPHESAISTPELAKRYPLSMISPPARNFLNSTFVNVDSLR
STEGEPHLDIHPDDANARGVIDGELVRIFNDRGTMQARARVTDRARRGVVVGLSIWWKKL
APDGTNANELTSQRLTDMGRAPTFYDCLVEVAPLAHAA