Protein Info for ABZR87_RS01395 in Ralstonia sp. UNC404CL21Col

Annotation: glutamate-5-semialdehyde dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 426 PF00171: Aldedh" amino acids 15 to 284 (270 residues), 54.4 bits, see alignment E=4.1e-19 amino acids 318 to 382 (65 residues), 31.7 bits, see alignment E=3.1e-12 TIGR00407: glutamate-5-semialdehyde dehydrogenase" amino acids 17 to 415 (399 residues), 478.1 bits, see alignment E=9.8e-148

Best Hits

Swiss-Prot: 99% identical to PROA_RALPJ: Gamma-glutamyl phosphate reductase (proA) from Ralstonia pickettii (strain 12J)

KEGG orthology group: K00147, glutamate-5-semialdehyde dehydrogenase [EC: 1.2.1.41] (inferred from 98% identity to rpf:Rpic12D_2570)

Predicted SEED Role

"Gamma-glutamyl phosphate reductase (EC 1.2.1.41)" in subsystem Proline Synthesis (EC 1.2.1.41)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.2.1.41

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (426 amino acids)

>ABZR87_RS01395 glutamate-5-semialdehyde dehydrogenase (Ralstonia sp. UNC404CL21Col)
MKQLDVNEYMALVGRQARTASRGMARAGTAQKNRALLHIAAAVRRDAAKLKEVNARDVER
ARANGQDAAFIDRLTLTDRAIETMAAGLEQIAALPDPIGEISNMKFRPTGIQVGQMRVPL
GVIGIIYESRPNVTVDAAALCIKSGNATILRGGSEAIESNGALAALIEEGLADAGLPANA
VQVVATTDRAAVGKLITMTEYVDVIVPRGGKSLIARLIEEARVPMIKHLDGICHVYIDVD
ADIEKAVRVCDNAKTQRYAPCNTMETLLVSRDVAARALPPLAKIYQDKGVELRVCPATRA
TLEAAGFGNLKDAVEADWHTEYLAPILSIRTVDGLDDAIEHINTYGSAHTDSIITENYST
GMRFLREVDSASVMINASTRFADGFEYGLGAEIGISNDKLHARGPVGLEGLTSLKYVVFG
HGEIRT