Protein Info for ABZR87_RS00705 in Ralstonia sp. UNC404CL21Col

Annotation: superoxide dismutase [Fe]

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00081: Sod_Fe_N
  • amino acids 2 to 81 (80 residues), 116.8 bits, E=4.7e-38
• PF02777: Sod_Fe_C
  • amino acids 89 to 190 (102 residues), 146.8 bits, E=1.9e-47

Best Hits

Swiss-Prot: 83% identical to SODF_BURSP: Superoxide dismutase [Fe] from Burkholderia sp.

KEGG orthology group: K04564, superoxide dismutase, Fe-Mn family [EC: 1.15.1.1] (inferred from 100% identity to rpi:Rpic_2803)

MetaCyc: 83% identical to superoxide dismutase (Fe) (Burkholderia sp. AK-5)
Superoxide dismutase. [EC: 1.15.1.1]

Predicted SEED Role

"Superoxide dismutase [Fe] (EC 1.15.1.1)" in subsystem Oxidative stress (EC 1.15.1.1)

MetaCyc Pathways

• reactive oxygen species degradation (4/4 steps found)
• ethene biosynthesis III (microbes) (6/7 steps found)
• superoxide radicals degradation (2/2 steps found)

Isozymes

Compare fitness of predicted isozymes for: 1.15.1.1

Use Curated BLAST to search for 1.15.1.1

Protein Sequence (192 amino acids)

>ABZR87_RS00705 superoxide dismutase [Fe] (Ralstonia sp. UNC404CL21Col)
MEHTLPPLPYAQDALAPHISKETLEFHYGKHHQTYVTNLNNLIKGTEFENLSLEDIVKKS
SGGVFNNAAQVWNHTFYWNGLKPQGGGAPTGALADAINAKWGSFDKFKEEFTKTAIGTFG
SGWAWLVKKADGSLDLVSTSNAATPLTTDAKPLLTCDVWEHAYYIDYRNARPKYVEAFWN
LVNWDFVAKNFA