Protein Info for ABZR87_RS00200 in Ralstonia sp. UNC404CL21Col

Annotation: phosphoadenylyl-sulfate reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 275 PF01507: PAPS_reduct" amino acids 59 to 234 (176 residues), 142.2 bits, see alignment E=9e-46 TIGR02055: adenylylsulfate reductase, thioredoxin dependent" amino acids 61 to 258 (198 residues), 267.6 bits, see alignment E=3.3e-84

Best Hits

Swiss-Prot: 57% identical to CYSH_NEIMB: Phosphoadenosine phosphosulfate reductase (cysH1) from Neisseria meningitidis serogroup B (strain MC58)

KEGG orthology group: K00390, phosphoadenosine phosphosulfate reductase [EC: 1.8.4.8] (inferred from 98% identity to rpf:Rpic12D_2227)

MetaCyc: 53% identical to assimilatory adenylyl-sulfate reductase (Allochromatium vinosum)
Adenylyl-sulfate reductase (glutathione). [EC: 1.8.4.9]

Predicted SEED Role

"Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)" in subsystem Cysteine Biosynthesis (EC 1.8.4.10, EC 1.8.4.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.8.4.10 or 1.8.4.8 or 1.8.4.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (275 amino acids)

>ABZR87_RS00200 phosphoadenylyl-sulfate reductase (Ralstonia sp. UNC404CL21Col)
MSDVQDVSVSEVPVSAIGRPVLWTRPAYTGTAEALAAKEAALFERLAEIAAKHGVAKFAT
SLAAEDMVVTDAILRSPEAVRAHLPIFTLQTGRLHAETLEMLDRVRAHYGYAIEQYAPDA
RAVEAYVRDHGLNAFYDSIELRKACCNIRKVVPLNRALKDADAWLTGQRREQAVTRADLP
FAEDDEARGIAKYNPLFDWSEAEVWAYLEQHNVPTNALHDKGYPSIGCEPCTRAVRAGED
VRAGRWWWESRDSKECGLHAANAVTSSATHPSQQN