Protein Info for ABZR87_RS00200 in Ralstonia sp. UNC404CL21Col
Annotation: phosphoadenylyl-sulfate reductase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 57% identical to CYSH_NEIMB: Phosphoadenosine phosphosulfate reductase (cysH1) from Neisseria meningitidis serogroup B (strain MC58)
KEGG orthology group: K00390, phosphoadenosine phosphosulfate reductase [EC: 1.8.4.8] (inferred from 98% identity to rpf:Rpic12D_2227)MetaCyc: 53% identical to assimilatory adenylyl-sulfate reductase (Allochromatium vinosum)
Adenylyl-sulfate reductase (glutathione). [EC: 1.8.4.9]
Predicted SEED Role
"Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)" in subsystem Cysteine Biosynthesis (EC 1.8.4.10, EC 1.8.4.8)
MetaCyc Pathways
- superpathway of L-methionine biosynthesis (by sulfhydrylation) (12/12 steps found)
- superpathway of sulfate assimilation and cysteine biosynthesis (9/9 steps found)
- assimilatory sulfate reduction I (4/4 steps found)
- assimilatory sulfate reduction III (3/3 steps found)
- assimilatory sulfate reduction IV (3/4 steps found)
- assimilatory sulfate reduction II (2/3 steps found)
- superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) (7/10 steps found)
- selenate reduction (2/5 steps found)
- superpathway of seleno-compound metabolism (6/19 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.8.4.10 or 1.8.4.8 or 1.8.4.9
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (275 amino acids)
>ABZR87_RS00200 phosphoadenylyl-sulfate reductase (Ralstonia sp. UNC404CL21Col) MSDVQDVSVSEVPVSAIGRPVLWTRPAYTGTAEALAAKEAALFERLAEIAAKHGVAKFAT SLAAEDMVVTDAILRSPEAVRAHLPIFTLQTGRLHAETLEMLDRVRAHYGYAIEQYAPDA RAVEAYVRDHGLNAFYDSIELRKACCNIRKVVPLNRALKDADAWLTGQRREQAVTRADLP FAEDDEARGIAKYNPLFDWSEAEVWAYLEQHNVPTNALHDKGYPSIGCEPCTRAVRAGED VRAGRWWWESRDSKECGLHAANAVTSSATHPSQQN