Protein Info for ABZR87_RS00190 in Ralstonia sp. UNC404CL21Col

Annotation: sulfate adenylyltransferase subunit 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 435 TIGR02034: sulfate adenylyltransferase, large subunit" amino acids 11 to 431 (421 residues), 526.8 bits, see alignment E=2e-162 PF00009: GTP_EFTU" amino acids 11 to 205 (195 residues), 135.7 bits, see alignment E=3e-43 PF03144: GTP_EFTU_D2" amino acids 260 to 319 (60 residues), 33.8 bits, see alignment E=7.2e-12

Best Hits

Swiss-Prot: 49% identical to CYSN_CROS8: Sulfate adenylyltransferase subunit 1 (cysN) from Cronobacter sakazakii (strain ATCC BAA-894)

KEGG orthology group: K00956, sulfate adenylyltransferase subunit 1 [EC: 2.7.7.4] (inferred from 98% identity to rpf:Rpic12D_2225)

MetaCyc: 53% identical to sulfate adenylyltransferase large subunit (Allochromatium vinosum)
Sulfate adenylyltransferase. [EC: 2.7.7.4]

Predicted SEED Role

"Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)" in subsystem Cysteine Biosynthesis (EC 2.7.7.4)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.7.4

Use Curated BLAST to search for 2.7.7.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (435 amino acids)

>ABZR87_RS00190 sulfate adenylyltransferase subunit 1 (Ralstonia sp. UNC404CL21Col)
MTNQASHQGLLRFITAGSVDDGKSTLIGRLLYDSKAVLTDQLQALANAKNKRTAGEQIDF
SLLTDGLEAEREQGITIDVAYRYFSTARRKFIIADTPGHEQYTRNMVTGASTAHAAIILI
DATRVTTVDGKTELLAQTKRHSAIVKLLELQHVIVAINKMDLVDYSEARFNEIRTAYDAL
ATQLGLHDVRYVPVSALRGDNIVHASEAMPWYQGEPLLALLEDLKVEETAPVGDDALRFP
VQLVARQDGSQADDFRGYMGRVEAGTVRVGQAVRVLPANRETTVAEVLTPNGSADAAGPG
ETITVRLADDVDISRGDTIVAAPTTAANAAKKLHADLCWFDEHELNPARKYVLKHTTATV
FARVSDVERVLDVHTLSHETGRKQIALNDIGTVNISLQKPIVCDVYGDNPATGAFILVDE
ATHHTVAAGMIRAFS