Protein Info for ABZR86_RS22165 in Dyella japonica UNC79MFTsu3.2

Annotation: ankyrin repeat domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 196 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF12796: Ank_2" amino acids 44 to 127 (84 residues), 45 bits, see alignment E=3.3e-15 PF00023: Ank" amino acids 71 to 103 (33 residues), 27.7 bits, see alignment 6e-10 amino acids 138 to 169 (32 residues), 15.2 bits, see alignment 5.5e-06 PF13637: Ank_4" amino acids 73 to 125 (53 residues), 26.5 bits, see alignment E=1.6e-09

Best Hits

KEGG orthology group: K06867, (no description) (inferred from 49% identity to xcc:XCC3948)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2JS43 at UniProt or InterPro

Protein Sequence (196 amino acids)

>ABZR86_RS22165 ankyrin repeat domain-containing protein (Dyella japonica UNC79MFTsu3.2)
MKRTLLLACLLLAACGSPPPATPAATPEAARRAEAEAELKTYFFEAARQGDVVLLREYVK
SGFPVDVRTPQGYTALILAAYHGQETAVRELIALGADPCARDNRGSTATMGAAFKGELAV
AKLLLDQPCAKADDRNRDGQTAAMYAALSGNARLLGLLRERGANLAMKDAQGRTAASIAR
EQGAEEVARSIEHAPH