Protein Info for ABZR86_RS21370 in Dyella japonica UNC79MFTsu3.2

Annotation: multidrug effflux MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 413 transmembrane" amino acids 19 to 41 (23 residues), see Phobius details amino acids 53 to 74 (22 residues), see Phobius details amino acids 83 to 107 (25 residues), see Phobius details amino acids 112 to 129 (18 residues), see Phobius details amino acids 145 to 165 (21 residues), see Phobius details amino acids 171 to 191 (21 residues), see Phobius details amino acids 224 to 242 (19 residues), see Phobius details amino acids 257 to 278 (22 residues), see Phobius details amino acids 288 to 309 (22 residues), see Phobius details amino acids 321 to 340 (20 residues), see Phobius details amino acids 352 to 372 (21 residues), see Phobius details amino acids 378 to 398 (21 residues), see Phobius details TIGR00710: drug resistance transporter, Bcr/CflA subfamily" amino acids 19 to 389 (371 residues), 204.9 bits, see alignment E=1.4e-64 PF07690: MFS_1" amino acids 24 to 362 (339 residues), 152.9 bits, see alignment E=1.1e-48 PF00083: Sugar_tr" amino acids 52 to 194 (143 residues), 32.3 bits, see alignment E=5.2e-12

Best Hits

KEGG orthology group: K07552, MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein (inferred from 50% identity to psu:Psesu_2163)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2BJN9 at UniProt or InterPro

Protein Sequence (413 amino acids)

>ABZR86_RS21370 multidrug effflux MFS transporter (Dyella japonica UNC79MFTsu3.2)
MRADPLHANSRAVPRSLPVLLAGLSMIGPFSIDAVFPAFPLIGAQFGVDNAQLQQLISIY
LLTYAAMSLFHGALSDAVGRKPVLVTGIAVYALASAGAALATSFPLLLACRGLQGMCAGA
GLVVGRAIVRDCYEGAAAQQLMSRVMMIFSIAPVIAPMVGAQILYFGSWHGIFWVLMGFT
AVLATALVLLLHESHPPEARTVFAPRALLAGYVGFARDLPFRPLLVSCSVNFAGLFLYIA
SAPRIVRDLLHLSAQGFPWLFLPVVAGLMGGAWLSGRLAVRRSQVYTVNLGYFSMLAACA
LHLLLALALPQPVLPWSMLPLILHGVGVQLAFPTLTLLLLDRFAHHRGGASSVQAFASLL
LCSVVAGVLSPLLADRMLYLALGASALTVIGWVSWRWYRRSVEKVAREAVEAA