Protein Info for ABZR86_RS21325 in Dyella japonica UNC79MFTsu3.2

Annotation: ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 317 PF00005: ABC_tran" amino acids 18 to 160 (143 residues), 100 bits, see alignment E=1.8e-32

Best Hits

KEGG orthology group: K09687, antibiotic transport system ATP-binding protein (inferred from 64% identity to mca:MCA1561)

Predicted SEED Role

"ABC transporter, ATP-binding protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2BI20 at UniProt or InterPro

Protein Sequence (317 amino acids)

>ABZR86_RS21325 ABC transporter ATP-binding protein (Dyella japonica UNC79MFTsu3.2)
MIETEQLTRRYGTLTAVDALSFRAEPGQVLGLLGPNGAGKSTVMRMIAGFLRPTAGTARV
CGHDVRKESLKAKRALGYLPEGAPSYGELTVREFLTFIVRSRGLSADQGYRRFEEVVGHL
QLETVLDTCIETLSKGLRRRVGLAQAIVHNPPVLMLDEPTDGLDPNQKHAVRQLIDTMAR
ERTILISTHLLEEVHALCNRVVIIADGRLLADATPAELEARSRYHGAVSFSAPGSGVSQE
MLGRLPQVASIEVDPLDGRITVFPRPGERILEPVESLLRQQGLEVSEIQLERGRLDEVFR
QITTGQAGPEPAREASP