Protein Info for ABZR86_RS20430 in Dyella japonica UNC79MFTsu3.2

Annotation: histidine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 351 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details transmembrane" amino acids 37 to 59 (23 residues), see Phobius details amino acids 72 to 96 (25 residues), see Phobius details amino acids 116 to 134 (19 residues), see Phobius details PF06580: His_kinase" amino acids 155 to 232 (78 residues), 82.5 bits, see alignment E=1e-27

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2C2T9 at UniProt or InterPro

Protein Sequence (351 amino acids)

>ABZR86_RS20430 histidine kinase (Dyella japonica UNC79MFTsu3.2)
MRFWRYLAAWSVPAVLFAIQGYSMDAMRGHTWNASDYIRWAMVQWYTLAVLAPGVFALAR
RFTVDSTAQWRYLPVYVAGSLVFSACAVLIGAMLGNLLEPGHPPFDDQLQQFIDKYVFID
FFIYWVLVVGWHALRFFREKDRRADQLQALLAQSRLQVLKMQLQPHFLFNTLHAITTLIR
EEPEVAEDMLLRLSELLRVYLDEDRHEIALARELELLDLYLGIQRVRFKDRLDARVDAAV
SALGGAVPGLILQPLVENAIHHGVGRHAGSDTVEVFAHRDTDHLYLEVRNRNGTLEVTPD
EAFTRGIGLSNTRLRLKELYGDAASVYIDALSPRGVTCRLRLPFRALGAAA