Protein Info for ABZR86_RS20335 in Dyella japonica UNC79MFTsu3.2

Annotation: histidine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 304 transmembrane" amino acids 12 to 39 (28 residues), see Phobius details amino acids 55 to 77 (23 residues), see Phobius details PF06580: His_kinase" amino acids 97 to 177 (81 residues), 87.5 bits, see alignment E=2.8e-29

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2C4B3 at UniProt or InterPro

Protein Sequence (304 amino acids)

>ABZR86_RS20335 histidine kinase (Dyella japonica UNC79MFTsu3.2)
MLQRALWRRRVSAWTTVAVLLVATYVPSVINSVIGGWAALHFGLISSLPLQRIFTGLDGC
WLPLIAFCAIHALVLHYTELQQSRLREAEAARLAQEAQLRALQYQLQPHFLFNTLNSISS
LVAVGRGADATRMLARLGDLLRDSLERSDAREVTLAEELSTTEHYLDIEKARLGRRLNVE
MRIGAGVLHALMPPLLLQPLVENAIRHGIAPRVEGGTLALHVERQGEWLGIELRNDGVPV
DERGDGNGRSSAVGLNNVRQRLGALYPEAHEFRLDLADDGSCQVHIRLPLRLSSSPRDAE
ALTA