Protein Info for ABZR86_RS20260 in Dyella japonica UNC79MFTsu3.2

Annotation: MinD/ParA family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 320 PF13614: AAA_31" amino acids 49 to 202 (154 residues), 45.1 bits, see alignment E=3.5e-15 PF09140: MipZ" amino acids 50 to 232 (183 residues), 45.3 bits, see alignment E=2.1e-15 PF10609: ParA" amino acids 50 to 288 (239 residues), 63.8 bits, see alignment E=5.3e-21 PF01656: CbiA" amino acids 51 to 264 (214 residues), 69.4 bits, see alignment E=8.8e-23

Best Hits

KEGG orthology group: K04562, flagellar biosynthesis protein FlhG (inferred from 56% identity to tgr:Tgr7_1337)

Predicted SEED Role

"Flagellar synthesis regulator FleN" in subsystem Flagellar motility or Flagellum

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2I5C3 at UniProt or InterPro

Protein Sequence (320 amino acids)

>ABZR86_RS20260 MinD/ParA family protein (Dyella japonica UNC79MFTsu3.2)
MMTTLAMNQAWGLNNLFSAFHSAGGDDSRPAAAMSGGGALPATPPRRCRAIAVAGGKGGV
GKSTVAVNLGMSLAMAGREVALLDADMGMANLDVLLGLQPARHIGHLLDGSCTLRELMLP
APHGLKVIPAGSGARRLAQLDTREHAAVIRAFDELPDPPEFLIVDTAAGVADNVVMFAAA
ADDVVLVVCDEPASLTDAYALTKVLSRDFRVRRFHVVANMVRHAGEARQLYDKLARVCDR
FLDVALDFMGTVPYDEHLRQAIRRQGAVVDLWPASRSARGFKQMAGAVDTWGEPPRTGRD
RIAFFGGQVGPAPDPIGGGM