Protein Info for ABZR86_RS19970 in Dyella japonica UNC79MFTsu3.2

Annotation: oxidative damage protection protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 75 92 PF04362: Iron_traffic" amino acids 1 to 88 (88 residues), 139.3 bits, see alignment E=1.5e-45

Best Hits

Swiss-Prot: 67% identical to FETP_THISH: Probable Fe(2+)-trafficking protein (Tgr7_2944) from Thioalkalivibrio sulfidiphilus (strain HL-EbGR7)

KEGG orthology group: None (inferred from 69% identity to tkm:TK90_2485)

Predicted SEED Role

"FIG001341: Probable Fe(2+)-trafficking protein YggX" in subsystem Heat shock dnaK gene cluster extended

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2I0B0 at UniProt or InterPro

Protein Sequence (92 amino acids)

>ABZR86_RS19970 oxidative damage protection protein (Dyella japonica UNC79MFTsu3.2)
MSRTVRCAKLGIEAEGLDFAPWPGALGQRIYAEISKPAWQEWLAHQTMLINEYRLNPLDP
KARKFLGEEMEKFLFGGDVARPEGYVAPEQDS