Protein Info for ABZR86_RS19875 in Dyella japonica UNC79MFTsu3.2

Annotation: CDP-alcohol phosphatidyltransferase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 187 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details amino acids 39 to 57 (19 residues), see Phobius details amino acids 78 to 99 (22 residues), see Phobius details amino acids 103 to 120 (18 residues), see Phobius details amino acids 131 to 151 (21 residues), see Phobius details amino acids 159 to 177 (19 residues), see Phobius details PF01066: CDP-OH_P_transf" amino acids 12 to 162 (151 residues), 101.4 bits, see alignment E=3.3e-33

Best Hits

KEGG orthology group: K00995, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC: 2.7.8.5] (inferred from 45% identity to nhl:Nhal_0875)

Predicted SEED Role

"CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria (EC 2.7.8.5)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.8.5

Use Curated BLAST to search for 2.7.8.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2HY39 at UniProt or InterPro

Protein Sequence (187 amino acids)

>ABZR86_RS19875 CDP-alcohol phosphatidyltransferase family protein (Dyella japonica UNC79MFTsu3.2)
MPGQPQLSPWRHLPNAITLLRILLVPPIGWAILAREPRLALGLIALAGFTDGLDGFLARR
CGWQSRLGGILDAAADKLLLVTCFVLLAVIGLAPWWLAALVCGRDAVIALGALAWRWLIG
PLRPQPSLVSKACTLLQILYLLGVLAADLGWPVPPMLPLAWLVAALCLASGADYVWRWSR
RARAALR