Protein Info for ABZR86_RS19670 in Dyella japonica UNC79MFTsu3.2

Annotation: M13 family metallopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 684 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details PF05649: Peptidase_M13_N" amino acids 42 to 429 (388 residues), 388.5 bits, see alignment E=4.5e-120 PF01431: Peptidase_M13" amino acids 481 to 681 (201 residues), 210.9 bits, see alignment E=1.7e-66

Best Hits

KEGG orthology group: K07386, putative endopeptidase [EC: 3.4.24.-] (inferred from 58% identity to shn:Shewana3_0500)

Predicted SEED Role

"Metallopeptidase"

Isozymes

Compare fitness of predicted isozymes for: 3.4.24.-

Use Curated BLAST to search for 3.4.24.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2JV58 at UniProt or InterPro

Protein Sequence (684 amino acids)

>ABZR86_RS19670 M13 family metallopeptidase (Dyella japonica UNC79MFTsu3.2)
MKSNRWILAAAIAAACATAHAAPAPASASGVDLAGIDHSVKPGDDFNGYASGNWAKTAQI
PADRSSTGIFLKVFEKAEQRNAELIRDAGKSNPKAGSNERKIADYYAAYMNEAAIEKNGL
APIKAELAEVDAIKNKTDLSRVLGGTLRSDVDPINATNWWTENLFGLFVTQGLEDPSHNV
PYLLQGGLGMPNRDYYLNDDAQMKGYRAKYQAYIASLLKQSGAQDADAKAAAILALETKI
AKAQASIVESEDVHKANNPWAMADFAKKAPGLDWNAYFTAAGLSGQKTVIAWQPEAISKL
SALTASEPLQTWKDWLTFHTLNHSAGLLPKAYADAQFDFYGHTLNGTPKQRDRWKRAVGS
TGDALGDAVGQIYVQRYFPASSKARVAQMVDNIKAAFNDHVDTLDWMSPVTKQKAKAKIA
TLKVGVGYPETWRDYSSLDVKADDALGNSLRAQEFEYKHQLAKLGQPVDKGEWWMTPQTV
NAVNLPLQNALNFPAAILEAPFFDPKADDAANYGSIGAVIGHEISHSFDNTGAEFDAEGR
LANWWTPEDQAHFKAAGQKLVEQYNAYEPLPGLHINGQQTLGENIADVSGLAIAHAAYVK
SLGGKPAPVIDGLSGDQRFFLAFAQSWRTKTRDAALRAQVIGDGHSPGSFRAQTVRNLDA
WYDAFKVQSGQKLYLDPKQRVKIW